Protein–RNA interactions for Protein: Q969T3

SNX21, Sorting nexin-21, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21Q969T3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.09■□□□□ 0.49
SNX21Q969T3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX21Q969T3 AC120114.3-201ENST00000611923 658 ntBASIC18.09■□□□□ 0.49
SNX21Q969T3 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.09■□□□□ 0.49
SNX21Q969T3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.09■□□□□ 0.49
SNX21Q969T3 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX21Q969T3 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SNX21Q969T3 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SNX21Q969T3 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX21Q969T3 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC18.09■□□□□ 0.49
SNX21Q969T3 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX21Q969T3 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX21Q969T3 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC18.08■□□□□ 0.49
SNX21Q969T3 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC18.08■□□□□ 0.49
SNX21Q969T3 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC18.08■□□□□ 0.49
SNX21Q969T3 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SNX21Q969T3 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SNX21Q969T3 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
SNX21Q969T3 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SNX21Q969T3 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SNX21Q969T3 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
SNX21Q969T3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SNX21Q969T3 INE2-201ENST00000630399 1874 ntBASIC18.08■□□□□ 0.49
SNX21Q969T3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SNX21Q969T3 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC18.08■□□□□ 0.48
SNX21Q969T3 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNX21Q969T3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNX21Q969T3 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNX21Q969T3 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
SNX21Q969T3 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
SNX21Q969T3 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
SNX21Q969T3 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.08■□□□□ 0.48
SNX21Q969T3 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.08■□□□□ 0.48
SNX21Q969T3 AC004066.1-201ENST00000502488 802 ntBASIC18.08■□□□□ 0.48
SNX21Q969T3 GAPDHP40-201ENST00000505218 1006 ntBASIC18.08■□□□□ 0.48
SNX21Q969T3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.08■□□□□ 0.48
SNX21Q969T3 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.08■□□□□ 0.48
SNX21Q969T3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.08■□□□□ 0.48
SNX21Q969T3 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.08■□□□□ 0.48
SNX21Q969T3 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.08■□□□□ 0.48
SNX21Q969T3 MTDHP5-201ENST00000598980 586 ntBASIC18.08■□□□□ 0.48
SNX21Q969T3 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.08■□□□□ 0.48
SNX21Q969T3 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
SNX21Q969T3 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNX21Q969T3 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
SNX21Q969T3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNX21Q969T3 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SNX21Q969T3 CETN4P-206ENST00000642099 2168 ntBASIC18.08■□□□□ 0.48
SNX21Q969T3 PCDHA3-202ENST00000532566 4594 ntBASIC18.08■□□□□ 0.48
SNX21Q969T3 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
SNX21Q969T3 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC18.08■□□□□ 0.48
SNX21Q969T3 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNX21Q969T3 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC18.08■□□□□ 0.48
SNX21Q969T3 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNX21Q969T3 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNX21Q969T3 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNX21Q969T3 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SNX21Q969T3 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SNX21Q969T3 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SNX21Q969T3 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNX21Q969T3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNX21Q969T3 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC18.07■□□□□ 0.48
SNX21Q969T3 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SNX21Q969T3 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNX21Q969T3 KRT8P22-201ENST00000562317 1415 ntBASIC18.07■□□□□ 0.48
SNX21Q969T3 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
SNX21Q969T3 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC18.07■□□□□ 0.48
SNX21Q969T3 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNX21Q969T3 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNX21Q969T3 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNX21Q969T3 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNX21Q969T3 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNX21Q969T3 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNX21Q969T3 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SNX21Q969T3 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNX21Q969T3 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC18.07■□□□□ 0.48
SNX21Q969T3 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
SNX21Q969T3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNX21Q969T3 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
SNX21Q969T3 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
SNX21Q969T3 RPL37AP1-201ENST00000412502 279 ntBASIC18.07■□□□□ 0.48
SNX21Q969T3 HLA-K-203ENST00000430151 1046 ntBASIC18.07■□□□□ 0.48
SNX21Q969T3 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNX21Q969T3 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.07■□□□□ 0.48
SNX21Q969T3 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.07■□□□□ 0.48
SNX21Q969T3 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.07■□□□□ 0.48
SNX21Q969T3 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.07■□□□□ 0.48
SNX21Q969T3 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNX21Q969T3 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
SNX21Q969T3 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
SNX21Q969T3 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNX21Q969T3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNX21Q969T3 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNX21Q969T3 KRT8P24-201ENST00000560290 1559 ntBASIC18.07■□□□□ 0.48
SNX21Q969T3 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNX21Q969T3 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNX21Q969T3 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SNX21Q969T3 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNX21Q969T3 AC068587.6-202ENST00000641839 5619 ntBASIC18.07■□□□□ 0.48
SNX21Q969T3 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms