Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
SCAMP4Q969E2 AC067930.6-201ENST00000623257 4947 ntBASIC15.16■□□□□ 0.02
SCAMP4Q969E2 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SCAMP4Q969E2 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.15■□□□□ 0.02
SCAMP4Q969E2 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
SCAMP4Q969E2 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.15■□□□□ 0.02
SCAMP4Q969E2 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCAMP4Q969E2 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SCAMP4Q969E2 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
SCAMP4Q969E2 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCAMP4Q969E2 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCAMP4Q969E2 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCAMP4Q969E2 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SCAMP4Q969E2 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCAMP4Q969E2 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCAMP4Q969E2 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SCAMP4Q969E2 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCAMP4Q969E2 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SCAMP4Q969E2 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCAMP4Q969E2 AL137783.1-201ENST00000623494 1896 ntBASIC15.15■□□□□ 0.02
SCAMP4Q969E2 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
SCAMP4Q969E2 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.15■□□□□ 0.02
SCAMP4Q969E2 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.15■□□□□ 0.02
SCAMP4Q969E2 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SCAMP4Q969E2 AC016694.1-201ENST00000434179 700 ntBASIC15.15■□□□□ 0.02
SCAMP4Q969E2 EIF3FP3-201ENST00000434851 1086 ntBASIC15.15■□□□□ 0.02
SCAMP4Q969E2 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.15■□□□□ 0.02
SCAMP4Q969E2 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SCAMP4Q969E2 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.15■□□□□ 0.02
SCAMP4Q969E2 AC022210.1-201ENST00000449856 793 ntBASIC15.15■□□□□ 0.02
SCAMP4Q969E2 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.15■□□□□ 0.02
SCAMP4Q969E2 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
SCAMP4Q969E2 AC025279.2-201ENST00000569730 653 ntBASIC15.15■□□□□ 0.02
SCAMP4Q969E2 AC017083.2-201ENST00000608069 979 ntBASIC15.15■□□□□ 0.02
SCAMP4Q969E2 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
SCAMP4Q969E2 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCAMP4Q969E2 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCAMP4Q969E2 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCAMP4Q969E2 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
SCAMP4Q969E2 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCAMP4Q969E2 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.15■□□□□ 0.02
SCAMP4Q969E2 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SCAMP4Q969E2 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SCAMP4Q969E2 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.14■□□□□ 0.01
SCAMP4Q969E2 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
SCAMP4Q969E2 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SCAMP4Q969E2 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.14■□□□□ 0.01
SCAMP4Q969E2 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SCAMP4Q969E2 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SCAMP4Q969E2 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.14■□□□□ 0.01
SCAMP4Q969E2 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.14■□□□□ 0.01
SCAMP4Q969E2 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SCAMP4Q969E2 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.14■□□□□ 0.01
SCAMP4Q969E2 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SCAMP4Q969E2 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SCAMP4Q969E2 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SCAMP4Q969E2 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SCAMP4Q969E2 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SCAMP4Q969E2 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SCAMP4Q969E2 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
SCAMP4Q969E2 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SCAMP4Q969E2 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SCAMP4Q969E2 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.14■□□□□ 0.01
SCAMP4Q969E2 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
SCAMP4Q969E2 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SCAMP4Q969E2 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.14■□□□□ 0.01
SCAMP4Q969E2 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SCAMP4Q969E2 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
SCAMP4Q969E2 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
SCAMP4Q969E2 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SCAMP4Q969E2 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.14■□□□□ 0.01
SCAMP4Q969E2 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
SCAMP4Q969E2 CTBP2P5-201ENST00000454986 1264 ntBASIC15.14■□□□□ 0.01
SCAMP4Q969E2 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SCAMP4Q969E2 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SCAMP4Q969E2 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
SCAMP4Q969E2 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.14■□□□□ 0.01
SCAMP4Q969E2 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.14■□□□□ 0.01
SCAMP4Q969E2 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.14■□□□□ 0.01
SCAMP4Q969E2 MIR4259-201ENST00000584466 101 ntBASIC15.14■□□□□ 0.01
SCAMP4Q969E2 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.14■□□□□ 0.01
SCAMP4Q969E2 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.14■□□□□ 0.01
SCAMP4Q969E2 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.14■□□□□ 0.01
SCAMP4Q969E2 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms