Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HPS1Q92902 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
HPS1Q92902 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
HPS1Q92902 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
HPS1Q92902 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HPS1Q92902 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.16□□□□□ -0.14
HPS1Q92902 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HPS1Q92902 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HPS1Q92902 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HPS1Q92902 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.16□□□□□ -0.14
HPS1Q92902 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HPS1Q92902 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HPS1Q92902 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HPS1Q92902 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HPS1Q92902 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HPS1Q92902 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HPS1Q92902 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.16□□□□□ -0.14
HPS1Q92902 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HPS1Q92902 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HPS1Q92902 LRRIQ3-202ENST00000370909 793 ntTSL 5 BASIC14.16□□□□□ -0.14
HPS1Q92902 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HPS1Q92902 AC004461.1-201ENST00000412461 403 ntBASIC14.16□□□□□ -0.14
HPS1Q92902 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.16□□□□□ -0.14
HPS1Q92902 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.16□□□□□ -0.14
HPS1Q92902 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.16□□□□□ -0.14
HPS1Q92902 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC14.16□□□□□ -0.14
HPS1Q92902 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.16□□□□□ -0.14
HPS1Q92902 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC14.16□□□□□ -0.14
HPS1Q92902 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HPS1Q92902 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.16□□□□□ -0.14
HPS1Q92902 AC004449.1-201ENST00000564240 433 ntBASIC14.16□□□□□ -0.14
HPS1Q92902 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.16□□□□□ -0.14
HPS1Q92902 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.16□□□□□ -0.14
HPS1Q92902 CYP2A7P1-201ENST00000595391 815 ntBASIC14.16□□□□□ -0.14
HPS1Q92902 AC022145.2-201ENST00000598203 171 ntBASIC14.16□□□□□ -0.14
HPS1Q92902 ACTG1P22-201ENST00000603793 1099 ntBASIC14.16□□□□□ -0.14
HPS1Q92902 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
HPS1Q92902 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HPS1Q92902 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HPS1Q92902 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.16□□□□□ -0.14
HPS1Q92902 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HPS1Q92902 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.16□□□□□ -0.14
HPS1Q92902 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HPS1Q92902 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.16□□□□□ -0.14
HPS1Q92902 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HPS1Q92902 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HPS1Q92902 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HPS1Q92902 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HPS1Q92902 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HPS1Q92902 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HPS1Q92902 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
HPS1Q92902 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HPS1Q92902 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.16□□□□□ -0.14
HPS1Q92902 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HPS1Q92902 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HPS1Q92902 AL023775.1-201ENST00000454907 1746 ntBASIC14.15□□□□□ -0.14
HPS1Q92902 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
HPS1Q92902 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HPS1Q92902 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HPS1Q92902 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HPS1Q92902 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC14.15□□□□□ -0.14
HPS1Q92902 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
HPS1Q92902 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
HPS1Q92902 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HPS1Q92902 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HPS1Q92902 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.15□□□□□ -0.14
HPS1Q92902 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HPS1Q92902 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HPS1Q92902 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.15□□□□□ -0.14
HPS1Q92902 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HPS1Q92902 MIR770-201ENST00000390219 98 ntBASIC14.15□□□□□ -0.14
HPS1Q92902 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HPS1Q92902 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.15□□□□□ -0.14
HPS1Q92902 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.15□□□□□ -0.14
HPS1Q92902 AC140658.5-201ENST00000438532 169 ntBASIC14.15□□□□□ -0.14
HPS1Q92902 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HPS1Q92902 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.15□□□□□ -0.14
HPS1Q92902 AC023141.5-201ENST00000458585 616 ntBASIC14.15□□□□□ -0.14
HPS1Q92902 HLA-J-203ENST00000494367 1087 ntBASIC14.15□□□□□ -0.14
HPS1Q92902 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
HPS1Q92902 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC14.15□□□□□ -0.14
HPS1Q92902 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
HPS1Q92902 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.15□□□□□ -0.14
HPS1Q92902 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.15□□□□□ -0.14
HPS1Q92902 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.15□□□□□ -0.14
HPS1Q92902 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HPS1Q92902 MIR3909-201ENST00000579518 119 ntBASIC14.15□□□□□ -0.14
HPS1Q92902 MIR4492-201ENST00000581627 80 ntBASIC14.15□□□□□ -0.14
HPS1Q92902 AC011467.4-201ENST00000594891 528 ntBASIC14.15□□□□□ -0.14
HPS1Q92902 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.15□□□□□ -0.14
HPS1Q92902 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.15□□□□□ -0.14
HPS1Q92902 LINC02084-201ENST00000606069 1096 ntBASIC14.15□□□□□ -0.14
HPS1Q92902 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.15□□□□□ -0.14
HPS1Q92902 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.15□□□□□ -0.14
HPS1Q92902 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HPS1Q92902 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HPS1Q92902 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HPS1Q92902 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HPS1Q92902 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HPS1Q92902 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms