Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 AC069262.1-201ENST00000539058 672 ntBASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 RN7SL828P-201ENST00000607615 303 ntBASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 AC139530.3-201ENST00000620344 690 ntBASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 LINC01230-201ENST00000625222 3017 ntBASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.95□□□□□ -0.34
RTN4IP1Q8WWV3 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 MTND6P24-201ENST00000440466 518 ntBASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 AC109322.1-201ENST00000524499 1264 ntBASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 CICP11-201ENST00000434745 2827 ntBASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 AC138969.2-201ENST00000532739 9932 ntBASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTN4IP1Q8WWV3 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms