Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SMIM4Q8WVI0 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 AC087388.1-201ENST00000571370 1112 ntBASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 TCAP-202ENST00000578283 583 ntTSL 5 BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 AL354702.1-201ENST00000442006 1960 ntBASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 AC015909.5-201ENST00000624336 2266 ntBASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 INE2-201ENST00000630399 1874 ntBASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
SMIM4Q8WVI0 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SMIM4Q8WVI0 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
SMIM4Q8WVI0 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
SMIM4Q8WVI0 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.09□□□□□ -0.31
SMIM4Q8WVI0 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.09□□□□□ -0.31
SMIM4Q8WVI0 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SMIM4Q8WVI0 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
SMIM4Q8WVI0 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.09□□□□□ -0.31
SMIM4Q8WVI0 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SMIM4Q8WVI0 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.09□□□□□ -0.31
SMIM4Q8WVI0 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SMIM4Q8WVI0 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
SMIM4Q8WVI0 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SMIM4Q8WVI0 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SMIM4Q8WVI0 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SMIM4Q8WVI0 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SMIM4Q8WVI0 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SMIM4Q8WVI0 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SMIM4Q8WVI0 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SMIM4Q8WVI0 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.09□□□□□ -0.31
SMIM4Q8WVI0 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SMIM4Q8WVI0 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.09□□□□□ -0.31
SMIM4Q8WVI0 HCG4B-203ENST00000450128 991 ntBASIC13.09□□□□□ -0.31
SMIM4Q8WVI0 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
SMIM4Q8WVI0 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.09□□□□□ -0.31
SMIM4Q8WVI0 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SMIM4Q8WVI0 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SMIM4Q8WVI0 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SMIM4Q8WVI0 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
SMIM4Q8WVI0 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SMIM4Q8WVI0 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SMIM4Q8WVI0 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
SMIM4Q8WVI0 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.09□□□□□ -0.31
SMIM4Q8WVI0 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
SMIM4Q8WVI0 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.09□□□□□ -0.31
SMIM4Q8WVI0 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.09□□□□□ -0.31
SMIM4Q8WVI0 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SMIM4Q8WVI0 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
SMIM4Q8WVI0 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.08□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms