Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CT55Q8WUE5 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CT55Q8WUE5 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CT55Q8WUE5 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CT55Q8WUE5 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CT55Q8WUE5 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.13□□□□□ -0.15
CT55Q8WUE5 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
CT55Q8WUE5 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CT55Q8WUE5 MIR769-201ENST00000390225 118 ntBASIC14.13□□□□□ -0.15
CT55Q8WUE5 RN7SKP175-201ENST00000408472 289 ntBASIC14.13□□□□□ -0.15
CT55Q8WUE5 HLA-DPB2-205ENST00000435074 1188 ntBASIC14.13□□□□□ -0.15
CT55Q8WUE5 SPTLC1P5-201ENST00000450718 252 ntBASIC14.13□□□□□ -0.15
CT55Q8WUE5 RNMTL1P1-201ENST00000454103 560 ntBASIC14.13□□□□□ -0.15
CT55Q8WUE5 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.13□□□□□ -0.15
CT55Q8WUE5 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CT55Q8WUE5 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.13□□□□□ -0.15
CT55Q8WUE5 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CT55Q8WUE5 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CT55Q8WUE5 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
CT55Q8WUE5 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CT55Q8WUE5 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.13□□□□□ -0.15
CT55Q8WUE5 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.13□□□□□ -0.15
CT55Q8WUE5 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.13□□□□□ -0.15
CT55Q8WUE5 AL358472.3-201ENST00000608147 415 ntBASIC14.13□□□□□ -0.15
CT55Q8WUE5 AL023803.2-201ENST00000620080 638 ntBASIC14.13□□□□□ -0.15
CT55Q8WUE5 AC138627.1-207ENST00000641560 1006 ntBASIC14.13□□□□□ -0.15
CT55Q8WUE5 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CT55Q8WUE5 FER1L4-210ENST00000615531 5998 ntBASIC14.13□□□□□ -0.15
CT55Q8WUE5 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CT55Q8WUE5 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CT55Q8WUE5 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CT55Q8WUE5 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.13□□□□□ -0.15
CT55Q8WUE5 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CT55Q8WUE5 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.13□□□□□ -0.15
CT55Q8WUE5 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CT55Q8WUE5 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CT55Q8WUE5 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CT55Q8WUE5 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CT55Q8WUE5 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CT55Q8WUE5 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CT55Q8WUE5 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.12□□□□□ -0.15
CT55Q8WUE5 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CT55Q8WUE5 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CT55Q8WUE5 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CT55Q8WUE5 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.12□□□□□ -0.15
CT55Q8WUE5 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.12□□□□□ -0.15
CT55Q8WUE5 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.12□□□□□ -0.15
CT55Q8WUE5 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CT55Q8WUE5 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CT55Q8WUE5 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CT55Q8WUE5 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CT55Q8WUE5 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CT55Q8WUE5 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.12□□□□□ -0.15
CT55Q8WUE5 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CT55Q8WUE5 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.12□□□□□ -0.15
CT55Q8WUE5 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CT55Q8WUE5 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CT55Q8WUE5 AC092506.1-202ENST00000401022 528 ntBASIC14.12□□□□□ -0.15
CT55Q8WUE5 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.12□□□□□ -0.15
CT55Q8WUE5 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CT55Q8WUE5 UPF3AP2-201ENST00000457924 1132 ntBASIC14.12□□□□□ -0.15
CT55Q8WUE5 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.12□□□□□ -0.15
CT55Q8WUE5 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC14.12□□□□□ -0.15
CT55Q8WUE5 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.12□□□□□ -0.15
CT55Q8WUE5 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC14.12□□□□□ -0.15
CT55Q8WUE5 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.12□□□□□ -0.15
CT55Q8WUE5 AC105129.2-201ENST00000559536 390 ntBASIC14.12□□□□□ -0.15
CT55Q8WUE5 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.12□□□□□ -0.15
CT55Q8WUE5 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.12□□□□□ -0.15
CT55Q8WUE5 MIR3619-201ENST00000579667 83 ntBASIC14.12□□□□□ -0.15
CT55Q8WUE5 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.12□□□□□ -0.15
CT55Q8WUE5 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.12□□□□□ -0.15
CT55Q8WUE5 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
CT55Q8WUE5 AC022748.3-201ENST00000621828 275 ntBASIC14.12□□□□□ -0.15
CT55Q8WUE5 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.12□□□□□ -0.15
CT55Q8WUE5 AC002472.3-201ENST00000640124 621 ntBASIC14.12□□□□□ -0.15
CT55Q8WUE5 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
CT55Q8WUE5 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CT55Q8WUE5 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.12□□□□□ -0.15
CT55Q8WUE5 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CT55Q8WUE5 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.12□□□□□ -0.15
CT55Q8WUE5 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CT55Q8WUE5 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
CT55Q8WUE5 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CT55Q8WUE5 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CT55Q8WUE5 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CT55Q8WUE5 AC012508.2-201ENST00000567613 1472 ntBASIC14.12□□□□□ -0.15
CT55Q8WUE5 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CT55Q8WUE5 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CT55Q8WUE5 AL359258.3-201ENST00000622910 2331 ntBASIC14.12□□□□□ -0.15
CT55Q8WUE5 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.11□□□□□ -0.15
CT55Q8WUE5 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CT55Q8WUE5 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CT55Q8WUE5 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CT55Q8WUE5 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CT55Q8WUE5 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CT55Q8WUE5 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CT55Q8WUE5 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.11□□□□□ -0.15
CT55Q8WUE5 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CT55Q8WUE5 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms