Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.29■□□□□ 0.2
LMO3Q8TAP4 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LMO3Q8TAP4 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LMO3Q8TAP4 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
LMO3Q8TAP4 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
LMO3Q8TAP4 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LMO3Q8TAP4 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
LMO3Q8TAP4 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LMO3Q8TAP4 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
LMO3Q8TAP4 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LMO3Q8TAP4 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LMO3Q8TAP4 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LMO3Q8TAP4 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
LMO3Q8TAP4 AP001267.2-201ENST00000532619 2086 ntBASIC16.28■□□□□ 0.2
LMO3Q8TAP4 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LMO3Q8TAP4 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
LMO3Q8TAP4 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.28■□□□□ 0.2
LMO3Q8TAP4 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.28■□□□□ 0.2
LMO3Q8TAP4 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
LMO3Q8TAP4 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LMO3Q8TAP4 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LMO3Q8TAP4 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LMO3Q8TAP4 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
LMO3Q8TAP4 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
LMO3Q8TAP4 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.28■□□□□ 0.2
LMO3Q8TAP4 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LMO3Q8TAP4 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.28■□□□□ 0.2
LMO3Q8TAP4 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.28■□□□□ 0.2
LMO3Q8TAP4 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.28■□□□□ 0.2
LMO3Q8TAP4 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.28■□□□□ 0.2
LMO3Q8TAP4 AC092364.2-202ENST00000597012 1073 ntBASIC16.28■□□□□ 0.2
LMO3Q8TAP4 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.28■□□□□ 0.2
LMO3Q8TAP4 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.28■□□□□ 0.2
LMO3Q8TAP4 AC007686.3-201ENST00000619017 3487 ntBASIC16.28■□□□□ 0.2
LMO3Q8TAP4 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LMO3Q8TAP4 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LMO3Q8TAP4 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LMO3Q8TAP4 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.28■□□□□ 0.2
LMO3Q8TAP4 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LMO3Q8TAP4 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
LMO3Q8TAP4 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LMO3Q8TAP4 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.28■□□□□ 0.2
LMO3Q8TAP4 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LMO3Q8TAP4 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LMO3Q8TAP4 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
LMO3Q8TAP4 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LMO3Q8TAP4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LMO3Q8TAP4 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LMO3Q8TAP4 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.27■□□□□ 0.2
LMO3Q8TAP4 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.27■□□□□ 0.2
LMO3Q8TAP4 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
LMO3Q8TAP4 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LMO3Q8TAP4 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.27■□□□□ 0.2
LMO3Q8TAP4 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LMO3Q8TAP4 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
LMO3Q8TAP4 AC097359.2-201ENST00000604992 2389 ntBASIC16.27■□□□□ 0.2
LMO3Q8TAP4 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.27■□□□□ 0.2
LMO3Q8TAP4 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LMO3Q8TAP4 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LMO3Q8TAP4 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LMO3Q8TAP4 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LMO3Q8TAP4 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.27■□□□□ 0.2
LMO3Q8TAP4 ACTG1P3-201ENST00000431775 1114 ntBASIC16.27■□□□□ 0.2
LMO3Q8TAP4 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.27■□□□□ 0.2
LMO3Q8TAP4 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
LMO3Q8TAP4 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LMO3Q8TAP4 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LMO3Q8TAP4 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
LMO3Q8TAP4 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LMO3Q8TAP4 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.27■□□□□ 0.2
LMO3Q8TAP4 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LMO3Q8TAP4 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LMO3Q8TAP4 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LMO3Q8TAP4 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.27■□□□□ 0.2
LMO3Q8TAP4 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LMO3Q8TAP4 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
LMO3Q8TAP4 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LMO3Q8TAP4 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
LMO3Q8TAP4 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.27■□□□□ 0.19
LMO3Q8TAP4 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.27■□□□□ 0.19
LMO3Q8TAP4 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
LMO3Q8TAP4 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LMO3Q8TAP4 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
LMO3Q8TAP4 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LMO3Q8TAP4 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LMO3Q8TAP4 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LMO3Q8TAP4 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.26■□□□□ 0.19
LMO3Q8TAP4 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LMO3Q8TAP4 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.26■□□□□ 0.19
LMO3Q8TAP4 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LMO3Q8TAP4 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LMO3Q8TAP4 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LMO3Q8TAP4 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.26■□□□□ 0.19
LMO3Q8TAP4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.26■□□□□ 0.19
LMO3Q8TAP4 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.26■□□□□ 0.19
LMO3Q8TAP4 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LMO3Q8TAP4 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.26■□□□□ 0.19
LMO3Q8TAP4 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LMO3Q8TAP4 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LMO3Q8TAP4 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms