Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.4■□□□□ 0.22
BEST2Q8NFU1 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.4■□□□□ 0.22
BEST2Q8NFU1 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.4■□□□□ 0.22
BEST2Q8NFU1 RNA5SP486-201ENST00000515961 83 ntBASIC16.4■□□□□ 0.22
BEST2Q8NFU1 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.4■□□□□ 0.22
BEST2Q8NFU1 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.4■□□□□ 0.22
BEST2Q8NFU1 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.4■□□□□ 0.22
BEST2Q8NFU1 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.4■□□□□ 0.22
BEST2Q8NFU1 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.4■□□□□ 0.22
BEST2Q8NFU1 AC138951.2-201ENST00000623455 1161 ntBASIC16.4■□□□□ 0.22
BEST2Q8NFU1 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
BEST2Q8NFU1 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
BEST2Q8NFU1 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
BEST2Q8NFU1 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BEST2Q8NFU1 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
BEST2Q8NFU1 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.4■□□□□ 0.22
BEST2Q8NFU1 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
BEST2Q8NFU1 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
BEST2Q8NFU1 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.4■□□□□ 0.22
BEST2Q8NFU1 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BEST2Q8NFU1 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BEST2Q8NFU1 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.4■□□□□ 0.22
BEST2Q8NFU1 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.4■□□□□ 0.22
BEST2Q8NFU1 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.39■□□□□ 0.22
BEST2Q8NFU1 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 WASH3P-207ENST00000560956 1394 ntBASIC16.39■□□□□ 0.21
BEST2Q8NFU1 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 AC055811.4-201ENST00000624039 1754 ntBASIC16.39■□□□□ 0.21
BEST2Q8NFU1 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 CSF2RBP1-201ENST00000447905 391 ntBASIC16.39■□□□□ 0.21
BEST2Q8NFU1 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 AC078819.1-201ENST00000547454 765 ntBASIC16.39■□□□□ 0.21
BEST2Q8NFU1 AC012085.1-201ENST00000548270 765 ntBASIC16.39■□□□□ 0.21
BEST2Q8NFU1 AL583810.1-201ENST00000553344 1045 ntBASIC16.39■□□□□ 0.21
BEST2Q8NFU1 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 DUX4L47-201ENST00000566374 394 ntBASIC16.39■□□□□ 0.21
BEST2Q8NFU1 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 ENPP7P14-201ENST00000621765 1040 ntBASIC16.39■□□□□ 0.21
BEST2Q8NFU1 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 PPT1-215ENST00000641471 2368 ntBASIC16.39■□□□□ 0.21
BEST2Q8NFU1 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
BEST2Q8NFU1 MROH4P-201ENST00000431302 1578 ntBASIC16.38■□□□□ 0.21
BEST2Q8NFU1 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.38■□□□□ 0.21
BEST2Q8NFU1 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 AC006001.1-201ENST00000325130 474 ntBASIC16.38■□□□□ 0.21
BEST2Q8NFU1 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.38■□□□□ 0.21
BEST2Q8NFU1 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms