Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 AC015922.1-201ENST00000421102 1152 ntBASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 AC025181.2-201ENST00000606994 802 ntBASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 AC117489.1-201ENST00000625169 3217 ntBASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.98□□□□□ -0.17
CLDN22Q8N7P3 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 AC027601.5-201ENST00000624065 2482 ntBASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 KRT18P43-201ENST00000469825 1281 ntBASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 AC025048.3-201ENST00000590609 569 ntBASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 AC005702.4-201ENST00000618393 416 ntBASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CLDN22Q8N7P3 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms