Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 POM121L8P-201ENST00000417732 1281 ntBASIC15.48■□□□□ 0.07
SYNPOQ8N3V7 POM121L9P-203ENST00000441984 1285 ntBASIC15.48■□□□□ 0.07
SYNPOQ8N3V7 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC15.48■□□□□ 0.07
SYNPOQ8N3V7 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
SYNPOQ8N3V7 TSACC-208ENST00000481479 741 ntTSL 2 BASIC15.48■□□□□ 0.07
SYNPOQ8N3V7 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC15.48■□□□□ 0.07
SYNPOQ8N3V7 RN7SL720P-201ENST00000488178 304 ntBASIC15.48■□□□□ 0.07
SYNPOQ8N3V7 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC15.48■□□□□ 0.07
SYNPOQ8N3V7 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.48■□□□□ 0.07
SYNPOQ8N3V7 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
SYNPOQ8N3V7 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.48■□□□□ 0.07
SYNPOQ8N3V7 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SYNPOQ8N3V7 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC15.48■□□□□ 0.07
SYNPOQ8N3V7 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC15.48■□□□□ 0.07
SYNPOQ8N3V7 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC15.48■□□□□ 0.07
SYNPOQ8N3V7 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
SYNPOQ8N3V7 AP001505.2-201ENST00000616815 443 ntBASIC15.48■□□□□ 0.07
SYNPOQ8N3V7 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
SYNPOQ8N3V7 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
SYNPOQ8N3V7 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.48■□□□□ 0.07
SYNPOQ8N3V7 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.48■□□□□ 0.07
SYNPOQ8N3V7 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SYNPOQ8N3V7 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SYNPOQ8N3V7 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.48■□□□□ 0.07
SYNPOQ8N3V7 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.48■□□□□ 0.07
SYNPOQ8N3V7 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.48■□□□□ 0.07
SYNPOQ8N3V7 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 TUBBP5-203ENST00000508529 1334 ntBASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 AL136309.1-201ENST00000403917 691 ntBASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 AL354877.1-201ENST00000424412 413 ntBASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 TMEM198B-204ENST00000484016 896 ntBASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 AC005740.2-201ENST00000511085 419 ntBASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 AC103702.1-201ENST00000548801 2630 ntBASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 AC069224.1-201ENST00000566372 1715 ntBASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 OR10B1P-201ENST00000601666 907 ntBASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SYNPOQ8N3V7 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SYNPOQ8N3V7 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SYNPOQ8N3V7 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SYNPOQ8N3V7 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SYNPOQ8N3V7 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.46■□□□□ 0.07
SYNPOQ8N3V7 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SYNPOQ8N3V7 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.46■□□□□ 0.07
SYNPOQ8N3V7 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
SYNPOQ8N3V7 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SYNPOQ8N3V7 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
SYNPOQ8N3V7 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SYNPOQ8N3V7 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.46■□□□□ 0.07
SYNPOQ8N3V7 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.46■□□□□ 0.07
SYNPOQ8N3V7 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SYNPOQ8N3V7 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SYNPOQ8N3V7 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SYNPOQ8N3V7 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.46■□□□□ 0.07
SYNPOQ8N3V7 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
SYNPOQ8N3V7 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.46■□□□□ 0.07
SYNPOQ8N3V7 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.46■□□□□ 0.07
SYNPOQ8N3V7 Z97180.1-201ENST00000445173 988 ntBASIC15.46■□□□□ 0.07
SYNPOQ8N3V7 CHMP1AP1-201ENST00000445563 662 ntBASIC15.46■□□□□ 0.07
SYNPOQ8N3V7 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms