Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 REXO1L4P-201ENST00000605109 1937 ntBASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 AC012508.2-201ENST00000567613 1472 ntBASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 AC011467.4-201ENST00000594891 528 ntBASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 DRD5P1-201ENST00000456605 1438 ntBASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC116Q8IYX3 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 AC007541.1-201ENST00000570282 1469 ntBASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 AC093004.1-201ENST00000508850 424 ntBASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 SAMD11P1-201ENST00000571429 661 ntBASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 AL049840.4-201ENST00000602422 811 ntBASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 AC026790.2-201ENST00000606282 430 ntBASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 AL096865.1-201ENST00000606796 927 ntBASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 MIR8072-201ENST00000614241 80 ntBASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 CICP24-201ENST00000605464 2705 ntBASIC14.46□□□□□ -0.09
CCDC116Q8IYX3 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms