Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 MIR33B-201ENST00000385104 96 ntBASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 CMC1-204ENST00000423894 549 ntTSL 2 BASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 EEF1DP6-201ENST00000449232 372 ntBASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 AL133499.1-201ENST00000596207 608 ntBASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 AC008825.2-201ENST00000603374 718 ntBASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS4Q8IUM7 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 RN7SKP230-201ENST00000365642 335 ntBASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 MPV17-204ENST00000399052 749 ntTSL 4 BASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 AL596276.2-201ENST00000447525 331 ntBASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 PRKXP1-201ENST00000561423 1122 ntBASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 SNORD3B-2-202ENST00000571722 791 ntBASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 AC132192.2-201ENST00000596206 1147 ntBASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 AL132994.2-201ENST00000603120 687 ntBASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 SPCS2P2-201ENST00000603270 608 ntBASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 AF254983.2-201ENST00000612331 135 ntBASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 AP000346.4-201ENST00000614827 381 ntBASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 AL353770.1-201ENST00000614915 403 ntBASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 AC090616.6-203ENST00000579186 1945 ntBASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 AC099398.1-201ENST00000567919 2776 ntBASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 PCDHB19P-201ENST00000570871 2371 ntBASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 AL138725.1-201ENST00000407347 1314 ntBASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS4Q8IUM7 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS4Q8IUM7 AC020910.5-201ENST00000623668 1865 ntBASIC16.18■□□□□ 0.18
NPAS4Q8IUM7 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.18■□□□□ 0.18
NPAS4Q8IUM7 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS4Q8IUM7 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
NPAS4Q8IUM7 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
NPAS4Q8IUM7 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS4Q8IUM7 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS4Q8IUM7 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
NPAS4Q8IUM7 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS4Q8IUM7 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS4Q8IUM7 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NPAS4Q8IUM7 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS4Q8IUM7 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.18■□□□□ 0.18
NPAS4Q8IUM7 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.18■□□□□ 0.18
NPAS4Q8IUM7 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS4Q8IUM7 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.18■□□□□ 0.18
NPAS4Q8IUM7 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.18■□□□□ 0.18
NPAS4Q8IUM7 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS4Q8IUM7 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NPAS4Q8IUM7 RN7SKP214-201ENST00000364208 315 ntBASIC16.18■□□□□ 0.18
NPAS4Q8IUM7 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms