Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.46■□□□□ 0.07
RAPH1Q70E73 AC138969.2-201ENST00000532739 9932 ntBASIC15.46■□□□□ 0.07
RAPH1Q70E73 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.46■□□□□ 0.07
RAPH1Q70E73 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAPH1Q70E73 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
RAPH1Q70E73 AC117489.1-201ENST00000625169 3217 ntBASIC15.46■□□□□ 0.07
RAPH1Q70E73 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.07
RAPH1Q70E73 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.46■□□□□ 0.07
RAPH1Q70E73 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.46■□□□□ 0.07
RAPH1Q70E73 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAPH1Q70E73 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RAPH1Q70E73 SPDYE7P-202ENST00000420373 878 ntBASIC15.46■□□□□ 0.07
RAPH1Q70E73 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.46■□□□□ 0.07
RAPH1Q70E73 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.46■□□□□ 0.07
RAPH1Q70E73 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.46■□□□□ 0.07
RAPH1Q70E73 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.46■□□□□ 0.07
RAPH1Q70E73 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
RAPH1Q70E73 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAPH1Q70E73 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAPH1Q70E73 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAPH1Q70E73 AC009093.7-201ENST00000623853 1223 ntBASIC15.46■□□□□ 0.07
RAPH1Q70E73 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.46■□□□□ 0.07
RAPH1Q70E73 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAPH1Q70E73 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAPH1Q70E73 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAPH1Q70E73 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.46■□□□□ 0.07
RAPH1Q70E73 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.46■□□□□ 0.06
RAPH1Q70E73 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.46■□□□□ 0.06
RAPH1Q70E73 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.46■□□□□ 0.06
RAPH1Q70E73 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.46■□□□□ 0.06
RAPH1Q70E73 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RAPH1Q70E73 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RAPH1Q70E73 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
RAPH1Q70E73 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RAPH1Q70E73 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC15.46■□□□□ 0.06
RAPH1Q70E73 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RAPH1Q70E73 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.45■□□□□ 0.06
RAPH1Q70E73 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAPH1Q70E73 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAPH1Q70E73 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAPH1Q70E73 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.45■□□□□ 0.06
RAPH1Q70E73 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
RAPH1Q70E73 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
RAPH1Q70E73 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
RAPH1Q70E73 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.45■□□□□ 0.06
RAPH1Q70E73 CETN4P-206ENST00000642099 2168 ntBASIC15.45■□□□□ 0.06
RAPH1Q70E73 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.45■□□□□ 0.06
RAPH1Q70E73 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAPH1Q70E73 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAPH1Q70E73 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.45■□□□□ 0.06
RAPH1Q70E73 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.45■□□□□ 0.06
RAPH1Q70E73 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.45■□□□□ 0.06
RAPH1Q70E73 AC112482.1-201ENST00000492080 688 ntBASIC15.45■□□□□ 0.06
RAPH1Q70E73 SLED1-202ENST00000512051 380 ntBASIC15.45■□□□□ 0.06
RAPH1Q70E73 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.45■□□□□ 0.06
RAPH1Q70E73 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.45■□□□□ 0.06
RAPH1Q70E73 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
RAPH1Q70E73 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.45■□□□□ 0.06
RAPH1Q70E73 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.45■□□□□ 0.06
RAPH1Q70E73 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.45■□□□□ 0.06
RAPH1Q70E73 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAPH1Q70E73 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAPH1Q70E73 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAPH1Q70E73 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RAPH1Q70E73 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAPH1Q70E73 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC15.45■□□□□ 0.06
RAPH1Q70E73 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.45■□□□□ 0.06
RAPH1Q70E73 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.45■□□□□ 0.06
RAPH1Q70E73 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RAPH1Q70E73 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.45■□□□□ 0.06
RAPH1Q70E73 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAPH1Q70E73 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAPH1Q70E73 AL137784.3-201ENST00000623858 2288 ntBASIC15.45■□□□□ 0.06
RAPH1Q70E73 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAPH1Q70E73 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAPH1Q70E73 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAPH1Q70E73 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RAPH1Q70E73 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAPH1Q70E73 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAPH1Q70E73 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAPH1Q70E73 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAPH1Q70E73 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RAPH1Q70E73 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.44■□□□□ 0.06
RAPH1Q70E73 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.44■□□□□ 0.06
RAPH1Q70E73 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
RAPH1Q70E73 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
RAPH1Q70E73 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAPH1Q70E73 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAPH1Q70E73 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
RAPH1Q70E73 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.44■□□□□ 0.06
RAPH1Q70E73 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RAPH1Q70E73 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
RAPH1Q70E73 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.44■□□□□ 0.06
RAPH1Q70E73 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAPH1Q70E73 SERBP1P3-201ENST00000459980 809 ntBASIC15.44■□□□□ 0.06
RAPH1Q70E73 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RAPH1Q70E73 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.44■□□□□ 0.06
RAPH1Q70E73 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAPH1Q70E73 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAPH1Q70E73 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms