Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASC4Q6P4E1 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASC4Q6P4E1 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CASC4Q6P4E1 TUBB3P1-201ENST00000405796 1332 ntBASIC15.68■□□□□ 0.1
CASC4Q6P4E1 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASC4Q6P4E1 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.68■□□□□ 0.1
CASC4Q6P4E1 FAM45BP-202ENST00000592932 1624 ntBASIC15.68■□□□□ 0.1
CASC4Q6P4E1 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.68■□□□□ 0.1
CASC4Q6P4E1 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASC4Q6P4E1 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CASC4Q6P4E1 AC007292.2-201ENST00000593524 1812 ntBASIC15.68■□□□□ 0.1
CASC4Q6P4E1 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASC4Q6P4E1 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CASC4Q6P4E1 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.68■□□□□ 0.1
CASC4Q6P4E1 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
CASC4Q6P4E1 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASC4Q6P4E1 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.68■□□□□ 0.1
CASC4Q6P4E1 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASC4Q6P4E1 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASC4Q6P4E1 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.68■□□□□ 0.1
CASC4Q6P4E1 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.68■□□□□ 0.1
CASC4Q6P4E1 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CASC4Q6P4E1 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASC4Q6P4E1 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CASC4Q6P4E1 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASC4Q6P4E1 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
CASC4Q6P4E1 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CASC4Q6P4E1 AL512361.1-201ENST00000554200 418 ntBASIC15.68■□□□□ 0.1
CASC4Q6P4E1 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.68■□□□□ 0.1
CASC4Q6P4E1 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.68■□□□□ 0.1
CASC4Q6P4E1 AC079781.4-201ENST00000641908 219 ntBASIC15.68■□□□□ 0.1
CASC4Q6P4E1 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CASC4Q6P4E1 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CASC4Q6P4E1 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASC4Q6P4E1 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASC4Q6P4E1 LINC00552-201ENST00000625151 2579 ntBASIC15.68■□□□□ 0.1
CASC4Q6P4E1 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASC4Q6P4E1 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.68■□□□□ 0.1
CASC4Q6P4E1 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
CASC4Q6P4E1 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASC4Q6P4E1 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 MIR1233-2-201ENST00000408138 82 ntBASIC15.67■□□□□ 0.1
CASC4Q6P4E1 MIR1233-1-201ENST00000408722 82 ntBASIC15.67■□□□□ 0.1
CASC4Q6P4E1 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 AC025678.2-201ENST00000562061 970 ntBASIC15.67■□□□□ 0.1
CASC4Q6P4E1 AC051619.7-201ENST00000568314 623 ntBASIC15.67■□□□□ 0.1
CASC4Q6P4E1 AC074044.1-201ENST00000609673 707 ntBASIC15.67■□□□□ 0.1
CASC4Q6P4E1 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 AC073592.8-201ENST00000624126 511 ntBASIC15.67■□□□□ 0.1
CASC4Q6P4E1 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 AL109936.8-201ENST00000641772 604 ntBASIC15.67■□□□□ 0.1
CASC4Q6P4E1 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 ACE3P-201ENST00000423435 1973 ntBASIC15.67■□□□□ 0.1
CASC4Q6P4E1 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 AP000845.1-201ENST00000581677 2131 ntBASIC15.67■□□□□ 0.1
CASC4Q6P4E1 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASC4Q6P4E1 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASC4Q6P4E1 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms