Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 MIR5100-201ENST00000579544 119 ntBASIC11.62□□□□□ -0.55
MRPL54Q6P161 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
MRPL54Q6P161 AC005363.2-201ENST00000618631 242 ntBASIC11.62□□□□□ -0.55
MRPL54Q6P161 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC11.62□□□□□ -0.55
MRPL54Q6P161 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC11.62□□□□□ -0.55
MRPL54Q6P161 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC11.62□□□□□ -0.55
MRPL54Q6P161 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
MRPL54Q6P161 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC11.62□□□□□ -0.55
MRPL54Q6P161 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC11.62□□□□□ -0.55
MRPL54Q6P161 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
MRPL54Q6P161 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
MRPL54Q6P161 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
MRPL54Q6P161 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
MRPL54Q6P161 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
MRPL54Q6P161 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC11.62□□□□□ -0.55
MRPL54Q6P161 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
MRPL54Q6P161 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
MRPL54Q6P161 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
MRPL54Q6P161 AC006504.4-201ENST00000592118 1568 ntBASIC11.62□□□□□ -0.55
MRPL54Q6P161 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC11.62□□□□□ -0.55
MRPL54Q6P161 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
MRPL54Q6P161 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
MRPL54Q6P161 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
MRPL54Q6P161 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC11.61□□□□□ -0.55
MRPL54Q6P161 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL54Q6P161 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC11.61□□□□□ -0.55
MRPL54Q6P161 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL54Q6P161 MIR497HG-202ENST00000572453 3838 ntBASIC11.61□□□□□ -0.55
MRPL54Q6P161 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL54Q6P161 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL54Q6P161 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL54Q6P161 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
MRPL54Q6P161 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC11.61□□□□□ -0.55
MRPL54Q6P161 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC11.61□□□□□ -0.55
MRPL54Q6P161 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
MRPL54Q6P161 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL54Q6P161 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
MRPL54Q6P161 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL54Q6P161 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC11.61□□□□□ -0.55
MRPL54Q6P161 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL54Q6P161 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL54Q6P161 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL54Q6P161 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL54Q6P161 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL54Q6P161 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL54Q6P161 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC11.61□□□□□ -0.55
MRPL54Q6P161 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL54Q6P161 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL54Q6P161 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL54Q6P161 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC11.61□□□□□ -0.55
MRPL54Q6P161 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
MRPL54Q6P161 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL54Q6P161 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC11.61□□□□□ -0.55
MRPL54Q6P161 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL54Q6P161 PMS2P4-201ENST00000412466 1052 ntBASIC11.61□□□□□ -0.55
MRPL54Q6P161 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL54Q6P161 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL54Q6P161 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL54Q6P161 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
MRPL54Q6P161 TPSP2-201ENST00000561760 610 ntBASIC11.61□□□□□ -0.55
MRPL54Q6P161 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL54Q6P161 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC11.61□□□□□ -0.55
MRPL54Q6P161 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC11.61□□□□□ -0.55
MRPL54Q6P161 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC11.61□□□□□ -0.55
MRPL54Q6P161 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC11.61□□□□□ -0.55
MRPL54Q6P161 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC11.61□□□□□ -0.55
MRPL54Q6P161 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
MRPL54Q6P161 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC11.61□□□□□ -0.55
MRPL54Q6P161 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
MRPL54Q6P161 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
MRPL54Q6P161 AL591684.3-201ENST00000605187 298 ntBASIC11.61□□□□□ -0.55
MRPL54Q6P161 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC11.61□□□□□ -0.55
MRPL54Q6P161 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC11.61□□□□□ -0.55
MRPL54Q6P161 AC006011.2-201ENST00000621313 1158 ntBASIC11.61□□□□□ -0.55
MRPL54Q6P161 AC023090.2-201ENST00000625182 2110 ntBASIC11.61□□□□□ -0.55
MRPL54Q6P161 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC11.61□□□□□ -0.55
MRPL54Q6P161 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC11.61□□□□□ -0.55
MRPL54Q6P161 AC016734.2-201ENST00000624325 1377 ntBASIC11.61□□□□□ -0.55
MRPL54Q6P161 USP4-203ENST00000415188 1454 ntTSL 3 BASIC11.61□□□□□ -0.55
MRPL54Q6P161 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
MRPL54Q6P161 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL54Q6P161 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL54Q6P161 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC11.61□□□□□ -0.55
MRPL54Q6P161 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL54Q6P161 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL54Q6P161 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC11.61□□□□□ -0.55
MRPL54Q6P161 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC11.61□□□□□ -0.55
MRPL54Q6P161 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL54Q6P161 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL54Q6P161 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
MRPL54Q6P161 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
MRPL54Q6P161 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL54Q6P161 NUTM2HP-201ENST00000442076 2498 ntBASIC11.61□□□□□ -0.55
MRPL54Q6P161 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL54Q6P161 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL54Q6P161 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
MRPL54Q6P161 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
MRPL54Q6P161 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC11.6□□□□□ -0.55
MRPL54Q6P161 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL54Q6P161 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms