Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HIST2H2BCQ6DN03 GDNF-207ENST00000515058 764 ntTSL 5 BASIC12.87□□□□□ -0.35
HIST2H2BCQ6DN03 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC12.87□□□□□ -0.35
HIST2H2BCQ6DN03 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC12.87□□□□□ -0.35
HIST2H2BCQ6DN03 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HIST2H2BCQ6DN03 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
HIST2H2BCQ6DN03 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC12.87□□□□□ -0.35
HIST2H2BCQ6DN03 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
HIST2H2BCQ6DN03 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC12.87□□□□□ -0.35
HIST2H2BCQ6DN03 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC12.87□□□□□ -0.35
HIST2H2BCQ6DN03 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
HIST2H2BCQ6DN03 BANP-227ENST00000626016 2144 ntTSL 2 BASIC12.87□□□□□ -0.35
HIST2H2BCQ6DN03 AC110057.1-201ENST00000636031 898 ntBASIC12.87□□□□□ -0.35
HIST2H2BCQ6DN03 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
HIST2H2BCQ6DN03 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.87□□□□□ -0.35
HIST2H2BCQ6DN03 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST2H2BCQ6DN03 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HIST2H2BCQ6DN03 ALOX12P2-203ENST00000570921 1945 ntBASIC12.87□□□□□ -0.35
HIST2H2BCQ6DN03 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST2H2BCQ6DN03 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST2H2BCQ6DN03 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST2H2BCQ6DN03 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST2H2BCQ6DN03 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HIST2H2BCQ6DN03 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
HIST2H2BCQ6DN03 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HIST2H2BCQ6DN03 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.87□□□□□ -0.35
HIST2H2BCQ6DN03 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC12.87□□□□□ -0.35
HIST2H2BCQ6DN03 AC078925.2-201ENST00000624013 1973 ntBASIC12.87□□□□□ -0.35
HIST2H2BCQ6DN03 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST2H2BCQ6DN03 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
HIST2H2BCQ6DN03 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST2H2BCQ6DN03 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HIST2H2BCQ6DN03 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 TSPY25P-201ENST00000429463 745 ntBASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 AC092580.1-201ENST00000433998 658 ntBASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 RNA5SP417-201ENST00000516459 108 ntBASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 TP53-221ENST00000615910 1149 ntTSL 5 BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 AC011840.2-201ENST00000563063 1520 ntBASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HIST2H2BCQ6DN03 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST2H2BCQ6DN03 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST2H2BCQ6DN03 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST2H2BCQ6DN03 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST2H2BCQ6DN03 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST2H2BCQ6DN03 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC12.85□□□□□ -0.35
HIST2H2BCQ6DN03 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST2H2BCQ6DN03 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC12.85□□□□□ -0.35
HIST2H2BCQ6DN03 AP003680.1-201ENST00000598970 3660 ntBASIC12.85□□□□□ -0.35
HIST2H2BCQ6DN03 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST2H2BCQ6DN03 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
HIST2H2BCQ6DN03 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
HIST2H2BCQ6DN03 NME4-203ENST00000397722 1232 ntTSL 2 BASIC12.85□□□□□ -0.35
HIST2H2BCQ6DN03 RN7SKP109-201ENST00000410592 316 ntBASIC12.85□□□□□ -0.35
HIST2H2BCQ6DN03 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
HIST2H2BCQ6DN03 AC108734.2-201ENST00000420887 1069 ntBASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms