Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDC42BPAQ5VT25 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDC42BPAQ5VT25 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
CDC42BPAQ5VT25 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDC42BPAQ5VT25 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
CDC42BPAQ5VT25 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC22.46■■□□□ 1.19
CDC42BPAQ5VT25 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC22.46■■□□□ 1.19
CDC42BPAQ5VT25 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDC42BPAQ5VT25 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
CDC42BPAQ5VT25 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
CDC42BPAQ5VT25 AC130709.1-201ENST00000484779 1212 ntBASIC22.45■■□□□ 1.19
CDC42BPAQ5VT25 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC22.45■■□□□ 1.19
CDC42BPAQ5VT25 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC22.45■■□□□ 1.19
CDC42BPAQ5VT25 POLD4-208ENST00000532830 904 ntTSL 3 BASIC22.45■■□□□ 1.19
CDC42BPAQ5VT25 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
CDC42BPAQ5VT25 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC22.45■■□□□ 1.19
CDC42BPAQ5VT25 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC22.45■■□□□ 1.19
CDC42BPAQ5VT25 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
CDC42BPAQ5VT25 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.19
CDC42BPAQ5VT25 AC025271.4-201ENST00000621477 1726 ntBASIC22.45■■□□□ 1.18
CDC42BPAQ5VT25 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDC42BPAQ5VT25 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDC42BPAQ5VT25 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDC42BPAQ5VT25 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDC42BPAQ5VT25 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CDC42BPAQ5VT25 R3HDM2P2-201ENST00000401880 2116 ntBASIC22.45■■□□□ 1.18
CDC42BPAQ5VT25 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC22.45■■□□□ 1.18
CDC42BPAQ5VT25 ABR-203ENST00000536794 2213 ntTSL 2 BASIC22.45■■□□□ 1.18
CDC42BPAQ5VT25 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDC42BPAQ5VT25 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
CDC42BPAQ5VT25 NEU3-207ENST00000534628 746 ntTSL 2 BASIC22.45■■□□□ 1.18
CDC42BPAQ5VT25 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC22.45■■□□□ 1.18
CDC42BPAQ5VT25 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDC42BPAQ5VT25 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC22.45■■□□□ 1.18
CDC42BPAQ5VT25 WASH3P-207ENST00000560956 1394 ntBASIC22.45■■□□□ 1.18
CDC42BPAQ5VT25 AC084018.2-201ENST00000613093 2607 ntBASIC22.45■■□□□ 1.18
CDC42BPAQ5VT25 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CDC42BPAQ5VT25 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC22.44■■□□□ 1.18
CDC42BPAQ5VT25 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC22.44■■□□□ 1.18
CDC42BPAQ5VT25 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CDC42BPAQ5VT25 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CDC42BPAQ5VT25 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CDC42BPAQ5VT25 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CDC42BPAQ5VT25 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CDC42BPAQ5VT25 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CDC42BPAQ5VT25 AC079328.2-201ENST00000561241 3354 ntBASIC22.44■■□□□ 1.18
CDC42BPAQ5VT25 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC22.44■■□□□ 1.18
CDC42BPAQ5VT25 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CDC42BPAQ5VT25 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CDC42BPAQ5VT25 HNRNPA1P27-201ENST00000412087 955 ntBASIC22.44■■□□□ 1.18
CDC42BPAQ5VT25 AC026320.2-201ENST00000434379 478 ntBASIC22.44■■□□□ 1.18
CDC42BPAQ5VT25 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC22.44■■□□□ 1.18
CDC42BPAQ5VT25 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CDC42BPAQ5VT25 PGAM1P5-201ENST00000548011 764 ntBASIC22.44■■□□□ 1.18
CDC42BPAQ5VT25 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC22.44■■□□□ 1.18
CDC42BPAQ5VT25 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC22.44■■□□□ 1.18
CDC42BPAQ5VT25 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
CDC42BPAQ5VT25 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC22.44■■□□□ 1.18
CDC42BPAQ5VT25 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC22.44■■□□□ 1.18
CDC42BPAQ5VT25 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC22.44■■□□□ 1.18
CDC42BPAQ5VT25 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CDC42BPAQ5VT25 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CDC42BPAQ5VT25 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
CDC42BPAQ5VT25 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
CDC42BPAQ5VT25 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
CDC42BPAQ5VT25 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC22.44■■□□□ 1.18
CDC42BPAQ5VT25 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC22.44■■□□□ 1.18
CDC42BPAQ5VT25 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
CDC42BPAQ5VT25 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC22.44■■□□□ 1.18
CDC42BPAQ5VT25 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CDC42BPAQ5VT25 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
CDC42BPAQ5VT25 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC22.44■■□□□ 1.18
CDC42BPAQ5VT25 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC22.44■■□□□ 1.18
CDC42BPAQ5VT25 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CDC42BPAQ5VT25 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CDC42BPAQ5VT25 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CDC42BPAQ5VT25 AL807761.2-201ENST00000422849 729 ntBASIC22.43■■□□□ 1.18
CDC42BPAQ5VT25 AL035414.1-201ENST00000451327 857 ntBASIC22.43■■□□□ 1.18
CDC42BPAQ5VT25 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC22.43■■□□□ 1.18
CDC42BPAQ5VT25 AC003686.1-201ENST00000550956 1034 ntBASIC22.43■■□□□ 1.18
CDC42BPAQ5VT25 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC22.43■■□□□ 1.18
CDC42BPAQ5VT25 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
CDC42BPAQ5VT25 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC22.43■■□□□ 1.18
CDC42BPAQ5VT25 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CDC42BPAQ5VT25 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CDC42BPAQ5VT25 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC22.43■■□□□ 1.18
CDC42BPAQ5VT25 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CDC42BPAQ5VT25 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CDC42BPAQ5VT25 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CDC42BPAQ5VT25 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CDC42BPAQ5VT25 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
CDC42BPAQ5VT25 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC22.43■■□□□ 1.18
CDC42BPAQ5VT25 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC22.43■■□□□ 1.18
CDC42BPAQ5VT25 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC22.43■■□□□ 1.18
CDC42BPAQ5VT25 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
CDC42BPAQ5VT25 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CDC42BPAQ5VT25 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CDC42BPAQ5VT25 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC22.43■■□□□ 1.18
CDC42BPAQ5VT25 JTB-202ENST00000356648 1040 ntTSL 2 BASIC22.43■■□□□ 1.18
CDC42BPAQ5VT25 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms