Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 AKR7A2P1-201ENST00000460134 915 ntBASIC18.11■□□□□ 0.49
PDS5AQ29RF7 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 VPS18-202ENST00000558474 873 ntTSL 3 BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 IGHV3OR16-16-201ENST00000563644 343 ntBASIC18.11■□□□□ 0.49
PDS5AQ29RF7 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 AL136301.1-201ENST00000615830 422 ntBASIC18.11■□□□□ 0.49
PDS5AQ29RF7 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 AC022532.1-201ENST00000624563 1728 ntBASIC18.11■□□□□ 0.49
PDS5AQ29RF7 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.11■□□□□ 0.49
PDS5AQ29RF7 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.1■□□□□ 0.49
PDS5AQ29RF7 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDS5AQ29RF7 KRT8P29-201ENST00000420409 1371 ntBASIC18.1■□□□□ 0.49
PDS5AQ29RF7 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC18.1■□□□□ 0.49
PDS5AQ29RF7 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDS5AQ29RF7 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC18.1■□□□□ 0.49
PDS5AQ29RF7 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDS5AQ29RF7 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDS5AQ29RF7 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDS5AQ29RF7 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDS5AQ29RF7 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PDS5AQ29RF7 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDS5AQ29RF7 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.1■□□□□ 0.49
PDS5AQ29RF7 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDS5AQ29RF7 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDS5AQ29RF7 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDS5AQ29RF7 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDS5AQ29RF7 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC18.1■□□□□ 0.49
PDS5AQ29RF7 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC18.1■□□□□ 0.49
PDS5AQ29RF7 GCOM2-201ENST00000509133 1104 ntBASIC18.1■□□□□ 0.49
PDS5AQ29RF7 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDS5AQ29RF7 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDS5AQ29RF7 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC18.1■□□□□ 0.49
PDS5AQ29RF7 AC020914.3-201ENST00000594712 304 ntBASIC18.1■□□□□ 0.49
PDS5AQ29RF7 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC18.1■□□□□ 0.49
PDS5AQ29RF7 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PDS5AQ29RF7 AC020910.5-201ENST00000623668 1865 ntBASIC18.1■□□□□ 0.49
PDS5AQ29RF7 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.1■□□□□ 0.49
PDS5AQ29RF7 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDS5AQ29RF7 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.1■□□□□ 0.49
PDS5AQ29RF7 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDS5AQ29RF7 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
PDS5AQ29RF7 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDS5AQ29RF7 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC18.1■□□□□ 0.49
PDS5AQ29RF7 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDS5AQ29RF7 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.1■□□□□ 0.49
PDS5AQ29RF7 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDS5AQ29RF7 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
PDS5AQ29RF7 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC18.09■□□□□ 0.49
PDS5AQ29RF7 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDS5AQ29RF7 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDS5AQ29RF7 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDS5AQ29RF7 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDS5AQ29RF7 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDS5AQ29RF7 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.09■□□□□ 0.49
PDS5AQ29RF7 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDS5AQ29RF7 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PDS5AQ29RF7 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDS5AQ29RF7 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
PDS5AQ29RF7 NME6-203ENST00000415644 849 ntTSL 2 BASIC18.09■□□□□ 0.49
PDS5AQ29RF7 FAM58BP-201ENST00000439056 645 ntBASIC18.09■□□□□ 0.49
PDS5AQ29RF7 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC18.09■□□□□ 0.49
PDS5AQ29RF7 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC18.09■□□□□ 0.49
PDS5AQ29RF7 TUBB8P8-201ENST00000458717 1058 ntBASIC18.09■□□□□ 0.49
PDS5AQ29RF7 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms