Protein–RNA interactions for Protein: Q16563

SYPL1, Synaptophysin-like protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1Q16563 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SYPL1Q16563 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.26□□□□□ -0.13
SYPL1Q16563 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SYPL1Q16563 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SYPL1Q16563 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
SYPL1Q16563 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SYPL1Q16563 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.26□□□□□ -0.13
SYPL1Q16563 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SYPL1Q16563 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.26□□□□□ -0.13
SYPL1Q16563 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SYPL1Q16563 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SYPL1Q16563 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SYPL1Q16563 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.26□□□□□ -0.13
SYPL1Q16563 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SYPL1Q16563 AC007787.1-201ENST00000588095 1583 ntBASIC14.26□□□□□ -0.13
SYPL1Q16563 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SYPL1Q16563 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SYPL1Q16563 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SYPL1Q16563 AC015656.1-201ENST00000624209 3578 ntBASIC14.26□□□□□ -0.13
SYPL1Q16563 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SYPL1Q16563 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.25□□□□□ -0.13
SYPL1Q16563 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SYPL1Q16563 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SYPL1Q16563 AL157414.3-201ENST00000624276 1954 ntBASIC14.25□□□□□ -0.13
SYPL1Q16563 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SYPL1Q16563 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SYPL1Q16563 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.25□□□□□ -0.13
SYPL1Q16563 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SYPL1Q16563 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SYPL1Q16563 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SYPL1Q16563 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SYPL1Q16563 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SYPL1Q16563 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SYPL1Q16563 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SYPL1Q16563 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SYPL1Q16563 LILRP1-201ENST00000444199 1370 ntBASIC14.25□□□□□ -0.13
SYPL1Q16563 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SYPL1Q16563 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.25□□□□□ -0.13
SYPL1Q16563 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
SYPL1Q16563 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SYPL1Q16563 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SYPL1Q16563 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SYPL1Q16563 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SYPL1Q16563 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SYPL1Q16563 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.25□□□□□ -0.13
SYPL1Q16563 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SYPL1Q16563 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SYPL1Q16563 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SYPL1Q16563 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SYPL1Q16563 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SYPL1Q16563 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.25□□□□□ -0.13
SYPL1Q16563 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.25□□□□□ -0.13
SYPL1Q16563 AC004890.2-204ENST00000481968 304 ntBASIC14.25□□□□□ -0.13
SYPL1Q16563 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.25□□□□□ -0.13
SYPL1Q16563 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SYPL1Q16563 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.25□□□□□ -0.13
SYPL1Q16563 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.25□□□□□ -0.13
SYPL1Q16563 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.25□□□□□ -0.13
SYPL1Q16563 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SYPL1Q16563 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.25□□□□□ -0.13
SYPL1Q16563 AC093512.1-201ENST00000617969 520 ntBASIC14.25□□□□□ -0.13
SYPL1Q16563 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SYPL1Q16563 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SYPL1Q16563 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
SYPL1Q16563 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SYPL1Q16563 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SYPL1Q16563 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SYPL1Q16563 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SYPL1Q16563 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
SYPL1Q16563 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SYPL1Q16563 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SYPL1Q16563 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SYPL1Q16563 AC022144.1-201ENST00000602255 1580 ntBASIC14.25□□□□□ -0.13
SYPL1Q16563 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
SYPL1Q16563 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.25□□□□□ -0.13
SYPL1Q16563 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SYPL1Q16563 AC005089.1-201ENST00000619486 2241 ntBASIC14.25□□□□□ -0.13
SYPL1Q16563 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.25□□□□□ -0.13
SYPL1Q16563 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.25□□□□□ -0.13
SYPL1Q16563 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.24□□□□□ -0.13
SYPL1Q16563 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
SYPL1Q16563 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SYPL1Q16563 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
SYPL1Q16563 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.24□□□□□ -0.13
SYPL1Q16563 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SYPL1Q16563 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SYPL1Q16563 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SYPL1Q16563 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
SYPL1Q16563 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SYPL1Q16563 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.24□□□□□ -0.13
SYPL1Q16563 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.24□□□□□ -0.13
SYPL1Q16563 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SYPL1Q16563 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SYPL1Q16563 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SYPL1Q16563 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.24□□□□□ -0.13
SYPL1Q16563 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SYPL1Q16563 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SYPL1Q16563 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SYPL1Q16563 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SYPL1Q16563 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms