Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC9.12□□□□□ -0.95
HSPG2P98160 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC9.12□□□□□ -0.95
HSPG2P98160 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC9.12□□□□□ -0.95
HSPG2P98160 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC9.12□□□□□ -0.95
HSPG2P98160 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC9.12□□□□□ -0.95
HSPG2P98160 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
HSPG2P98160 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
HSPG2P98160 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC9.12□□□□□ -0.95
HSPG2P98160 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC9.12□□□□□ -0.95
HSPG2P98160 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
HSPG2P98160 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
HSPG2P98160 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC9.12□□□□□ -0.95
HSPG2P98160 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
HSPG2P98160 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
HSPG2P98160 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
HSPG2P98160 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
HSPG2P98160 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
HSPG2P98160 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
HSPG2P98160 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC9.12□□□□□ -0.95
HSPG2P98160 RN7SL147P-201ENST00000487345 298 ntBASIC9.12□□□□□ -0.95
HSPG2P98160 RNA5SP406-201ENST00000516106 112 ntBASIC9.12□□□□□ -0.95
HSPG2P98160 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC9.12□□□□□ -0.95
HSPG2P98160 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC9.12□□□□□ -0.95
HSPG2P98160 COQ4-204ENST00000608951 781 ntTSL 2 BASIC9.12□□□□□ -0.95
HSPG2P98160 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
HSPG2P98160 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
HSPG2P98160 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
HSPG2P98160 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
HSPG2P98160 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
HSPG2P98160 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
HSPG2P98160 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC9.11□□□□□ -0.95
HSPG2P98160 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC9.11□□□□□ -0.95
HSPG2P98160 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
HSPG2P98160 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC9.11□□□□□ -0.95
HSPG2P98160 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
HSPG2P98160 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
HSPG2P98160 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
HSPG2P98160 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
HSPG2P98160 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC9.11□□□□□ -0.95
HSPG2P98160 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
HSPG2P98160 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
HSPG2P98160 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
HSPG2P98160 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
HSPG2P98160 AL356000.1-201ENST00000441073 1238 ntBASIC9.11□□□□□ -0.95
HSPG2P98160 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
HSPG2P98160 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC9.11□□□□□ -0.95
HSPG2P98160 RHOQP2-201ENST00000449922 579 ntBASIC9.11□□□□□ -0.95
HSPG2P98160 SLC25A15P1-201ENST00000456738 342 ntBASIC9.11□□□□□ -0.95
HSPG2P98160 SLC25A15P3-201ENST00000505530 290 ntBASIC9.11□□□□□ -0.95
HSPG2P98160 AC131206.1-201ENST00000538078 1211 ntBASIC9.11□□□□□ -0.95
HSPG2P98160 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC9.11□□□□□ -0.95
HSPG2P98160 RARS-210ENST00000626454 177 ntTSL 5 BASIC9.11□□□□□ -0.95
HSPG2P98160 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC9.11□□□□□ -0.95
HSPG2P98160 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC9.11□□□□□ -0.95
HSPG2P98160 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
HSPG2P98160 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
HSPG2P98160 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
HSPG2P98160 HLF-202ENST00000430986 1385 ntTSL 2 BASIC9.11□□□□□ -0.95
HSPG2P98160 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
HSPG2P98160 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
HSPG2P98160 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
HSPG2P98160 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC9.11□□□□□ -0.95
HSPG2P98160 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC9.11□□□□□ -0.95
HSPG2P98160 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
HSPG2P98160 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
HSPG2P98160 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
HSPG2P98160 AL590440.2-201ENST00000641973 1595 ntBASIC9.11□□□□□ -0.95
HSPG2P98160 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC9.11□□□□□ -0.95
HSPG2P98160 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
HSPG2P98160 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
HSPG2P98160 LINC00528-201ENST00000600723 2160 ntBASIC9.11□□□□□ -0.95
HSPG2P98160 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC9.11□□□□□ -0.95
HSPG2P98160 AC120498.9-201ENST00000339021 3867 ntBASIC9.11□□□□□ -0.95
HSPG2P98160 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
HSPG2P98160 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC9.11□□□□□ -0.95
HSPG2P98160 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC9.11□□□□□ -0.95
HSPG2P98160 GUSBP10-201ENST00000417412 665 ntBASIC9.11□□□□□ -0.95
HSPG2P98160 RN7SL530P-201ENST00000485097 298 ntBASIC9.11□□□□□ -0.95
HSPG2P98160 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC9.11□□□□□ -0.95
HSPG2P98160 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
HSPG2P98160 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
HSPG2P98160 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
HSPG2P98160 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
HSPG2P98160 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
HSPG2P98160 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC9.11□□□□□ -0.95
HSPG2P98160 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC9.11□□□□□ -0.95
HSPG2P98160 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
HSPG2P98160 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC9.11□□□□□ -0.95
HSPG2P98160 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC9.11□□□□□ -0.95
HSPG2P98160 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC9.11□□□□□ -0.95
HSPG2P98160 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC9.11□□□□□ -0.95
HSPG2P98160 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC9.11□□□□□ -0.95
HSPG2P98160 BX322534.1-201ENST00000635574 241 ntBASIC9.11□□□□□ -0.95
HSPG2P98160 AC215524.1-201ENST00000635696 241 ntBASIC9.11□□□□□ -0.95
HSPG2P98160 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC9.11□□□□□ -0.95
HSPG2P98160 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
HSPG2P98160 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
HSPG2P98160 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC9.11□□□□□ -0.95
HSPG2P98160 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC9.11□□□□□ -0.95
HSPG2P98160 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms