Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SEC61A1P61619 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SEC61A1P61619 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
SEC61A1P61619 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.5□□□□□ -0.25
SEC61A1P61619 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
SEC61A1P61619 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
SEC61A1P61619 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SEC61A1P61619 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SEC61A1P61619 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.5□□□□□ -0.25
SEC61A1P61619 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.5□□□□□ -0.25
SEC61A1P61619 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SEC61A1P61619 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SEC61A1P61619 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.5□□□□□ -0.25
SEC61A1P61619 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.5□□□□□ -0.25
SEC61A1P61619 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.5□□□□□ -0.25
SEC61A1P61619 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.5□□□□□ -0.25
SEC61A1P61619 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.5□□□□□ -0.25
SEC61A1P61619 AC105250.1-201ENST00000509378 2057 ntBASIC13.5□□□□□ -0.25
SEC61A1P61619 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SEC61A1P61619 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SEC61A1P61619 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SEC61A1P61619 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
SEC61A1P61619 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SEC61A1P61619 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SEC61A1P61619 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SEC61A1P61619 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.5□□□□□ -0.25
SEC61A1P61619 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.5□□□□□ -0.25
SEC61A1P61619 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SEC61A1P61619 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SEC61A1P61619 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
SEC61A1P61619 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.5□□□□□ -0.25
SEC61A1P61619 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
SEC61A1P61619 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SEC61A1P61619 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SEC61A1P61619 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SEC61A1P61619 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SEC61A1P61619 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
SEC61A1P61619 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SEC61A1P61619 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SEC61A1P61619 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SEC61A1P61619 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SEC61A1P61619 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SEC61A1P61619 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SEC61A1P61619 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SEC61A1P61619 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SEC61A1P61619 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SEC61A1P61619 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SEC61A1P61619 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
SEC61A1P61619 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
SEC61A1P61619 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SEC61A1P61619 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SEC61A1P61619 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.49□□□□□ -0.25
SEC61A1P61619 AL035456.1-201ENST00000456064 1369 ntBASIC13.49□□□□□ -0.25
SEC61A1P61619 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SEC61A1P61619 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SEC61A1P61619 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SEC61A1P61619 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SEC61A1P61619 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.49□□□□□ -0.25
SEC61A1P61619 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SEC61A1P61619 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.49□□□□□ -0.25
SEC61A1P61619 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SEC61A1P61619 MIR661-201ENST00000384842 89 ntBASIC13.49□□□□□ -0.25
SEC61A1P61619 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
SEC61A1P61619 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.49□□□□□ -0.25
SEC61A1P61619 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.49□□□□□ -0.25
SEC61A1P61619 AC241585.1-201ENST00000433527 519 ntBASIC13.49□□□□□ -0.25
SEC61A1P61619 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.49□□□□□ -0.25
SEC61A1P61619 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.49□□□□□ -0.25
SEC61A1P61619 AL512638.1-201ENST00000457493 794 ntBASIC13.49□□□□□ -0.25
SEC61A1P61619 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.49□□□□□ -0.25
SEC61A1P61619 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SEC61A1P61619 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.49□□□□□ -0.25
SEC61A1P61619 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.49□□□□□ -0.25
SEC61A1P61619 AC024267.1-201ENST00000582320 895 ntBASIC13.49□□□□□ -0.25
SEC61A1P61619 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.49□□□□□ -0.25
SEC61A1P61619 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.49□□□□□ -0.25
SEC61A1P61619 AL589739.1-201ENST00000607720 493 ntBASIC13.49□□□□□ -0.25
SEC61A1P61619 AL133215.2-201ENST00000609242 977 ntBASIC13.49□□□□□ -0.25
SEC61A1P61619 AL590560.3-201ENST00000623350 461 ntBASIC13.49□□□□□ -0.25
SEC61A1P61619 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.49□□□□□ -0.25
SEC61A1P61619 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SEC61A1P61619 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SEC61A1P61619 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SEC61A1P61619 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.49□□□□□ -0.25
SEC61A1P61619 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.49□□□□□ -0.25
SEC61A1P61619 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SEC61A1P61619 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SEC61A1P61619 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SEC61A1P61619 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.49□□□□□ -0.25
SEC61A1P61619 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SEC61A1P61619 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.49□□□□□ -0.25
SEC61A1P61619 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SEC61A1P61619 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.49□□□□□ -0.25
SEC61A1P61619 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.49□□□□□ -0.25
SEC61A1P61619 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SEC61A1P61619 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SEC61A1P61619 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SEC61A1P61619 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
SEC61A1P61619 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SEC61A1P61619 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms