Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.45□□□□□ -0.1
RPS3AP61247 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.45□□□□□ -0.1
RPS3AP61247 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.45□□□□□ -0.1
RPS3AP61247 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPS3AP61247 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.45□□□□□ -0.1
RPS3AP61247 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.45□□□□□ -0.1
RPS3AP61247 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.45□□□□□ -0.1
RPS3AP61247 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.45□□□□□ -0.1
RPS3AP61247 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.45□□□□□ -0.1
RPS3AP61247 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.45□□□□□ -0.1
RPS3AP61247 TEX28P1-201ENST00000613479 1221 ntBASIC14.45□□□□□ -0.1
RPS3AP61247 TEX28P2-201ENST00000617764 1221 ntBASIC14.45□□□□□ -0.1
RPS3AP61247 MIR6069-201ENST00000620069 79 ntBASIC14.45□□□□□ -0.1
RPS3AP61247 AL590560.3-201ENST00000623350 461 ntBASIC14.45□□□□□ -0.1
RPS3AP61247 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.45□□□□□ -0.1
RPS3AP61247 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPS3AP61247 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.45□□□□□ -0.1
RPS3AP61247 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.45□□□□□ -0.1
RPS3AP61247 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPS3AP61247 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPS3AP61247 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPS3AP61247 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPS3AP61247 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPS3AP61247 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.45□□□□□ -0.1
RPS3AP61247 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPS3AP61247 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPS3AP61247 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
RPS3AP61247 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RPS3AP61247 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RPS3AP61247 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
RPS3AP61247 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RPS3AP61247 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
RPS3AP61247 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPS3AP61247 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RPS3AP61247 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPS3AP61247 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPS3AP61247 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
RPS3AP61247 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RPS3AP61247 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPS3AP61247 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPS3AP61247 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPS3AP61247 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.44□□□□□ -0.1
RPS3AP61247 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.44□□□□□ -0.1
RPS3AP61247 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RPS3AP61247 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPS3AP61247 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RPS3AP61247 AC004987.2-201ENST00000395959 1148 ntBASIC14.44□□□□□ -0.1
RPS3AP61247 SPDYE17-201ENST00000412399 783 ntBASIC14.44□□□□□ -0.1
RPS3AP61247 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.44□□□□□ -0.1
RPS3AP61247 RN7SL618P-201ENST00000477850 296 ntBASIC14.44□□□□□ -0.1
RPS3AP61247 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RPS3AP61247 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.44□□□□□ -0.1
RPS3AP61247 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.44□□□□□ -0.1
RPS3AP61247 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.44□□□□□ -0.1
RPS3AP61247 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.44□□□□□ -0.1
RPS3AP61247 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.44□□□□□ -0.1
RPS3AP61247 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.44□□□□□ -0.1
RPS3AP61247 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.44□□□□□ -0.1
RPS3AP61247 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.44□□□□□ -0.1
RPS3AP61247 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
RPS3AP61247 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.44□□□□□ -0.1
RPS3AP61247 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPS3AP61247 AGAP7P-201ENST00000582299 2062 ntBASIC14.44□□□□□ -0.1
RPS3AP61247 AGAP14-201ENST00000624701 2060 ntBASIC14.44□□□□□ -0.1
RPS3AP61247 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
RPS3AP61247 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPS3AP61247 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RPS3AP61247 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RPS3AP61247 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPS3AP61247 KRT8P12-202ENST00000472924 1397 ntBASIC14.44□□□□□ -0.1
RPS3AP61247 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.44□□□□□ -0.1
RPS3AP61247 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RPS3AP61247 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
RPS3AP61247 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
RPS3AP61247 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPS3AP61247 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RPS3AP61247 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPS3AP61247 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RPS3AP61247 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPS3AP61247 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.44□□□□□ -0.1
RPS3AP61247 AP001282.1-201ENST00000531301 1499 ntBASIC14.44□□□□□ -0.1
RPS3AP61247 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPS3AP61247 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
RPS3AP61247 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RPS3AP61247 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RPS3AP61247 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.43□□□□□ -0.1
RPS3AP61247 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPS3AP61247 AC087499.5-201ENST00000452760 1342 ntBASIC14.43□□□□□ -0.1
RPS3AP61247 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RPS3AP61247 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RPS3AP61247 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPS3AP61247 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RPS3AP61247 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPS3AP61247 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RPS3AP61247 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.43□□□□□ -0.1
RPS3AP61247 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.43□□□□□ -0.1
RPS3AP61247 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RPS3AP61247 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.43□□□□□ -0.1
RPS3AP61247 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
RPS3AP61247 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms