Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MCCD1P59942 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
MCCD1P59942 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
MCCD1P59942 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MCCD1P59942 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
MCCD1P59942 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MCCD1P59942 TMEM14DP-201ENST00000422205 345 ntBASIC16.22■□□□□ 0.19
MCCD1P59942 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.22■□□□□ 0.19
MCCD1P59942 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
MCCD1P59942 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.22■□□□□ 0.19
MCCD1P59942 RNA5SP486-201ENST00000515961 83 ntBASIC16.22■□□□□ 0.19
MCCD1P59942 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.22■□□□□ 0.19
MCCD1P59942 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.22■□□□□ 0.19
MCCD1P59942 AC106820.3-201ENST00000561653 397 ntBASIC16.22■□□□□ 0.19
MCCD1P59942 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.22■□□□□ 0.19
MCCD1P59942 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.22■□□□□ 0.19
MCCD1P59942 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.22■□□□□ 0.19
MCCD1P59942 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.22■□□□□ 0.19
MCCD1P59942 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MCCD1P59942 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.22■□□□□ 0.19
MCCD1P59942 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
MCCD1P59942 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MCCD1P59942 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MCCD1P59942 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.22■□□□□ 0.19
MCCD1P59942 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
MCCD1P59942 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
MCCD1P59942 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
MCCD1P59942 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MCCD1P59942 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
MCCD1P59942 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
MCCD1P59942 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
MCCD1P59942 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
MCCD1P59942 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MCCD1P59942 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
MCCD1P59942 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
MCCD1P59942 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.21■□□□□ 0.19
MCCD1P59942 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MCCD1P59942 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.21■□□□□ 0.19
MCCD1P59942 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.21■□□□□ 0.19
MCCD1P59942 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
MCCD1P59942 SALL4P5-201ENST00000419001 1760 ntBASIC16.21■□□□□ 0.19
MCCD1P59942 RN7SL832P-201ENST00000607781 1756 ntBASIC16.21■□□□□ 0.19
MCCD1P59942 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.21■□□□□ 0.19
MCCD1P59942 INE2-201ENST00000630399 1874 ntBASIC16.21■□□□□ 0.19
MCCD1P59942 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MCCD1P59942 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MCCD1P59942 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
MCCD1P59942 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
MCCD1P59942 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.21■□□□□ 0.19
MCCD1P59942 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.21■□□□□ 0.19
MCCD1P59942 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MCCD1P59942 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MCCD1P59942 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MCCD1P59942 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.21■□□□□ 0.19
MCCD1P59942 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.21■□□□□ 0.19
MCCD1P59942 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.21■□□□□ 0.19
MCCD1P59942 AL022328.1-201ENST00000610050 478 ntBASIC16.21■□□□□ 0.19
MCCD1P59942 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.21■□□□□ 0.19
MCCD1P59942 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MCCD1P59942 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.21■□□□□ 0.19
MCCD1P59942 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MCCD1P59942 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MCCD1P59942 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.21■□□□□ 0.19
MCCD1P59942 PKD1P1-201ENST00000458669 6805 ntBASIC16.21■□□□□ 0.19
MCCD1P59942 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
MCCD1P59942 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
MCCD1P59942 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
MCCD1P59942 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
MCCD1P59942 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
MCCD1P59942 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.21■□□□□ 0.18
MCCD1P59942 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.21■□□□□ 0.18
MCCD1P59942 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
MCCD1P59942 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MCCD1P59942 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MCCD1P59942 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MCCD1P59942 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.2■□□□□ 0.18
MCCD1P59942 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MCCD1P59942 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.2■□□□□ 0.18
MCCD1P59942 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MCCD1P59942 AGGF1P1-201ENST00000509500 2073 ntBASIC16.2■□□□□ 0.18
MCCD1P59942 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.2■□□□□ 0.18
MCCD1P59942 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MCCD1P59942 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
MCCD1P59942 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
MCCD1P59942 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MCCD1P59942 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC16.2■□□□□ 0.18
MCCD1P59942 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
MCCD1P59942 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MCCD1P59942 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MCCD1P59942 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MCCD1P59942 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MCCD1P59942 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MCCD1P59942 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.2■□□□□ 0.18
MCCD1P59942 RN7SKP175-201ENST00000408472 289 ntBASIC16.2■□□□□ 0.18
MCCD1P59942 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.2■□□□□ 0.18
MCCD1P59942 GAPDHP21-201ENST00000450301 1010 ntBASIC16.2■□□□□ 0.18
MCCD1P59942 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
MCCD1P59942 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.2■□□□□ 0.18
MCCD1P59942 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.2■□□□□ 0.18
MCCD1P59942 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms