Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.67□□□□□ -0.06
VSX2P58304 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VSX2P58304 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
VSX2P58304 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.67□□□□□ -0.06
VSX2P58304 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VSX2P58304 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VSX2P58304 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VSX2P58304 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VSX2P58304 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
VSX2P58304 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VSX2P58304 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VSX2P58304 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
VSX2P58304 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VSX2P58304 GK-202ENST00000378941 458 ntTSL 3 BASIC14.67□□□□□ -0.06
VSX2P58304 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.67□□□□□ -0.06
VSX2P58304 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VSX2P58304 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.67□□□□□ -0.06
VSX2P58304 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.67□□□□□ -0.06
VSX2P58304 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
VSX2P58304 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.67□□□□□ -0.06
VSX2P58304 AL355864.2-201ENST00000447420 863 ntBASIC14.67□□□□□ -0.06
VSX2P58304 BCRP2-202ENST00000447763 634 ntBASIC14.67□□□□□ -0.06
VSX2P58304 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
VSX2P58304 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VSX2P58304 GPR53P-205ENST00000457298 1084 ntBASIC14.67□□□□□ -0.06
VSX2P58304 BCRP6-201ENST00000510112 632 ntBASIC14.67□□□□□ -0.06
VSX2P58304 BCRP7-201ENST00000511549 544 ntBASIC14.67□□□□□ -0.06
VSX2P58304 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.67□□□□□ -0.06
VSX2P58304 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
VSX2P58304 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.67□□□□□ -0.06
VSX2P58304 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.67□□□□□ -0.06
VSX2P58304 SAMD11P1-201ENST00000571429 661 ntBASIC14.67□□□□□ -0.06
VSX2P58304 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.67□□□□□ -0.06
VSX2P58304 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.67□□□□□ -0.06
VSX2P58304 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VSX2P58304 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
VSX2P58304 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.67□□□□□ -0.06
VSX2P58304 AC233724.13-201ENST00000598383 410 ntBASIC14.67□□□□□ -0.06
VSX2P58304 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
VSX2P58304 AL162274.1-201ENST00000617191 1098 ntBASIC14.67□□□□□ -0.06
VSX2P58304 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VSX2P58304 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VSX2P58304 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VSX2P58304 AC018665.1-201ENST00000622927 1362 ntBASIC14.67□□□□□ -0.06
VSX2P58304 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
VSX2P58304 AC007787.1-201ENST00000588095 1583 ntBASIC14.67□□□□□ -0.06
VSX2P58304 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VSX2P58304 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
VSX2P58304 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
VSX2P58304 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.67□□□□□ -0.06
VSX2P58304 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.67□□□□□ -0.06
VSX2P58304 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
VSX2P58304 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.66□□□□□ -0.06
VSX2P58304 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.66□□□□□ -0.06
VSX2P58304 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
VSX2P58304 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.66□□□□□ -0.06
VSX2P58304 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VSX2P58304 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
VSX2P58304 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
VSX2P58304 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VSX2P58304 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
VSX2P58304 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
VSX2P58304 MIR600HG-201ENST00000449175 5984 ntBASIC14.66□□□□□ -0.06
VSX2P58304 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VSX2P58304 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VSX2P58304 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VSX2P58304 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
VSX2P58304 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VSX2P58304 AC112693.3-201ENST00000624819 1983 ntBASIC14.66□□□□□ -0.06
VSX2P58304 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VSX2P58304 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
VSX2P58304 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VSX2P58304 ACKR1-201ENST00000368121 1240 ntBASIC14.66□□□□□ -0.06
VSX2P58304 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
VSX2P58304 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.66□□□□□ -0.06
VSX2P58304 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VSX2P58304 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.66□□□□□ -0.06
VSX2P58304 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.66□□□□□ -0.06
VSX2P58304 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VSX2P58304 AC112492.5-201ENST00000421897 457 ntBASIC14.66□□□□□ -0.06
VSX2P58304 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.66□□□□□ -0.06
VSX2P58304 AC012441.1-201ENST00000446669 685 ntBASIC14.66□□□□□ -0.06
VSX2P58304 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.66□□□□□ -0.06
VSX2P58304 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.66□□□□□ -0.06
VSX2P58304 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.66□□□□□ -0.06
VSX2P58304 HILS1-202ENST00000545329 423 ntBASIC14.66□□□□□ -0.06
VSX2P58304 RAB43P1-201ENST00000561790 589 ntBASIC14.66□□□□□ -0.06
VSX2P58304 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.66□□□□□ -0.06
VSX2P58304 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.66□□□□□ -0.06
VSX2P58304 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.66□□□□□ -0.06
VSX2P58304 AL645728.2-202ENST00000641679 227 ntBASIC14.66□□□□□ -0.06
VSX2P58304 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.66□□□□□ -0.06
VSX2P58304 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VSX2P58304 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
VSX2P58304 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VSX2P58304 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
VSX2P58304 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.66□□□□□ -0.06
VSX2P58304 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.66□□□□□ -0.06
VSX2P58304 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VSX2P58304 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms