Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 RNA5SP412-201ENST00000516234 123 ntBASIC15.74■□□□□ 0.11
ATXN3P54252 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.74■□□□□ 0.11
ATXN3P54252 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.74■□□□□ 0.11
ATXN3P54252 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
ATXN3P54252 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.74■□□□□ 0.11
ATXN3P54252 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ATXN3P54252 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.74■□□□□ 0.11
ATXN3P54252 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.74■□□□□ 0.11
ATXN3P54252 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.74■□□□□ 0.11
ATXN3P54252 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
ATXN3P54252 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.74■□□□□ 0.11
ATXN3P54252 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.74■□□□□ 0.11
ATXN3P54252 AC244093.1-201ENST00000610837 814 ntBASIC15.74■□□□□ 0.11
ATXN3P54252 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.74■□□□□ 0.11
ATXN3P54252 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATXN3P54252 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.74■□□□□ 0.11
ATXN3P54252 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATXN3P54252 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATXN3P54252 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATXN3P54252 CYP4F24P-201ENST00000586049 1580 ntBASIC15.74■□□□□ 0.11
ATXN3P54252 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
ATXN3P54252 SSR4P1-203ENST00000599569 2260 ntBASIC15.74■□□□□ 0.11
ATXN3P54252 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.74■□□□□ 0.11
ATXN3P54252 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ATXN3P54252 PCGF3-213ENST00000620529 1899 ntBASIC15.74■□□□□ 0.11
ATXN3P54252 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ATXN3P54252 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
ATXN3P54252 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATXN3P54252 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ATXN3P54252 AC007686.3-201ENST00000619017 3487 ntBASIC15.73■□□□□ 0.11
ATXN3P54252 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
ATXN3P54252 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.73■□□□□ 0.11
ATXN3P54252 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATXN3P54252 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATXN3P54252 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.73■□□□□ 0.11
ATXN3P54252 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATXN3P54252 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ATXN3P54252 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.73■□□□□ 0.11
ATXN3P54252 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.73■□□□□ 0.11
ATXN3P54252 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATXN3P54252 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.73■□□□□ 0.11
ATXN3P54252 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.73■□□□□ 0.11
ATXN3P54252 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.73■□□□□ 0.11
ATXN3P54252 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.73■□□□□ 0.11
ATXN3P54252 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.73■□□□□ 0.11
ATXN3P54252 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATXN3P54252 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ATXN3P54252 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATXN3P54252 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
ATXN3P54252 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.73■□□□□ 0.11
ATXN3P54252 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.73■□□□□ 0.11
ATXN3P54252 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ATXN3P54252 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATXN3P54252 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.73■□□□□ 0.11
ATXN3P54252 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.73■□□□□ 0.11
ATXN3P54252 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.73■□□□□ 0.11
ATXN3P54252 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATXN3P54252 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ATXN3P54252 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.73■□□□□ 0.11
ATXN3P54252 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATXN3P54252 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATXN3P54252 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
ATXN3P54252 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.73■□□□□ 0.11
ATXN3P54252 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ATXN3P54252 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.73■□□□□ 0.11
ATXN3P54252 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATXN3P54252 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ATXN3P54252 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.72■□□□□ 0.11
ATXN3P54252 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.72■□□□□ 0.11
ATXN3P54252 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
ATXN3P54252 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ATXN3P54252 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATXN3P54252 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.72■□□□□ 0.11
ATXN3P54252 U82695.1-201ENST00000635752 1889 ntBASIC15.72■□□□□ 0.11
ATXN3P54252 AC069224.1-201ENST00000566372 1715 ntBASIC15.72■□□□□ 0.11
ATXN3P54252 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.72■□□□□ 0.11
ATXN3P54252 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATXN3P54252 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ATXN3P54252 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATXN3P54252 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ATXN3P54252 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.72■□□□□ 0.11
ATXN3P54252 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.72■□□□□ 0.11
ATXN3P54252 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.72■□□□□ 0.11
ATXN3P54252 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.72■□□□□ 0.11
ATXN3P54252 CSF2RBP1-201ENST00000447905 391 ntBASIC15.72■□□□□ 0.11
ATXN3P54252 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.72■□□□□ 0.11
ATXN3P54252 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.72■□□□□ 0.11
ATXN3P54252 FO681548.1-201ENST00000455617 1132 ntBASIC15.72■□□□□ 0.11
ATXN3P54252 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.72■□□□□ 0.11
ATXN3P54252 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
ATXN3P54252 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ATXN3P54252 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.72■□□□□ 0.11
ATXN3P54252 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.72■□□□□ 0.11
ATXN3P54252 MIR5189-201ENST00000577370 114 ntBASIC15.72■□□□□ 0.11
ATXN3P54252 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.72■□□□□ 0.11
ATXN3P54252 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.72■□□□□ 0.11
ATXN3P54252 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.72■□□□□ 0.11
ATXN3P54252 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATXN3P54252 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATXN3P54252 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms