Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.59□□□□□ -0.23
SLC25A1P53007 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC25A1P53007 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.59□□□□□ -0.23
SLC25A1P53007 AC092580.3-201ENST00000430932 139 ntBASIC13.59□□□□□ -0.23
SLC25A1P53007 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.59□□□□□ -0.23
SLC25A1P53007 DNAJB3-202ENST00000449667 1266 ntBASIC13.59□□□□□ -0.23
SLC25A1P53007 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.59□□□□□ -0.23
SLC25A1P53007 MEIS3P1-201ENST00000495167 958 ntBASIC13.59□□□□□ -0.23
SLC25A1P53007 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.59□□□□□ -0.23
SLC25A1P53007 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.59□□□□□ -0.23
SLC25A1P53007 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.59□□□□□ -0.23
SLC25A1P53007 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SLC25A1P53007 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.59□□□□□ -0.23
SLC25A1P53007 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.59□□□□□ -0.23
SLC25A1P53007 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.59□□□□□ -0.23
SLC25A1P53007 AL391069.4-201ENST00000609583 481 ntBASIC13.59□□□□□ -0.23
SLC25A1P53007 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
SLC25A1P53007 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC25A1P53007 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC25A1P53007 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC25A1P53007 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC25A1P53007 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SLC25A1P53007 BTBD7P1-201ENST00000447253 1453 ntBASIC13.59□□□□□ -0.23
SLC25A1P53007 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
SLC25A1P53007 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SLC25A1P53007 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC25A1P53007 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.59□□□□□ -0.23
SLC25A1P53007 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SLC25A1P53007 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.59□□□□□ -0.23
SLC25A1P53007 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
SLC25A1P53007 INTS4P1-203ENST00000641008 3683 ntBASIC13.59□□□□□ -0.23
SLC25A1P53007 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
SLC25A1P53007 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SLC25A1P53007 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC25A1P53007 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SLC25A1P53007 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SLC25A1P53007 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SLC25A1P53007 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.58□□□□□ -0.23
SLC25A1P53007 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
SLC25A1P53007 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SLC25A1P53007 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.58□□□□□ -0.23
SLC25A1P53007 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
SLC25A1P53007 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SLC25A1P53007 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
SLC25A1P53007 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SLC25A1P53007 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SLC25A1P53007 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SLC25A1P53007 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SLC25A1P53007 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.58□□□□□ -0.24
SLC25A1P53007 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SLC25A1P53007 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SLC25A1P53007 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SLC25A1P53007 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
SLC25A1P53007 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
SLC25A1P53007 AL645937.2-201ENST00000396808 931 ntBASIC13.58□□□□□ -0.24
SLC25A1P53007 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.58□□□□□ -0.24
SLC25A1P53007 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.58□□□□□ -0.24
SLC25A1P53007 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.58□□□□□ -0.24
SLC25A1P53007 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.58□□□□□ -0.24
SLC25A1P53007 AC004449.1-201ENST00000564240 433 ntBASIC13.58□□□□□ -0.24
SLC25A1P53007 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
SLC25A1P53007 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
SLC25A1P53007 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SLC25A1P53007 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SLC25A1P53007 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SLC25A1P53007 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.58□□□□□ -0.24
SLC25A1P53007 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SLC25A1P53007 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
SLC25A1P53007 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SLC25A1P53007 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
SLC25A1P53007 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.24
SLC25A1P53007 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
SLC25A1P53007 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SLC25A1P53007 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.58□□□□□ -0.24
SLC25A1P53007 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
SLC25A1P53007 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.58□□□□□ -0.24
SLC25A1P53007 AC018665.1-201ENST00000622927 1362 ntBASIC13.58□□□□□ -0.24
SLC25A1P53007 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
SLC25A1P53007 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SLC25A1P53007 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SLC25A1P53007 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SLC25A1P53007 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SLC25A1P53007 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SLC25A1P53007 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.57□□□□□ -0.24
SLC25A1P53007 AC100757.3-201ENST00000622361 1406 ntBASIC13.57□□□□□ -0.24
SLC25A1P53007 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.57□□□□□ -0.24
SLC25A1P53007 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
SLC25A1P53007 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.57□□□□□ -0.24
SLC25A1P53007 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SLC25A1P53007 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SLC25A1P53007 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.57□□□□□ -0.24
SLC25A1P53007 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SLC25A1P53007 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.57□□□□□ -0.24
SLC25A1P53007 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.57□□□□□ -0.24
SLC25A1P53007 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SLC25A1P53007 HSPA7-201ENST00000445535 1927 ntBASIC13.57□□□□□ -0.24
SLC25A1P53007 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SLC25A1P53007 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.57□□□□□ -0.24
SLC25A1P53007 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
SLC25A1P53007 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms