Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
BRCA2P51587 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BRCA2P51587 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC16.62■□□□□ 0.25
BRCA2P51587 AL157407.1-201ENST00000435784 904 ntBASIC16.62■□□□□ 0.25
BRCA2P51587 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BRCA2P51587 AC068867.1-201ENST00000559855 150 ntBASIC16.62■□□□□ 0.25
BRCA2P51587 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BRCA2P51587 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BRCA2P51587 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BRCA2P51587 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BRCA2P51587 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BRCA2P51587 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BRCA2P51587 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BRCA2P51587 KRT17P5-201ENST00000332088 839 ntBASIC16.62■□□□□ 0.25
BRCA2P51587 AC092638.2-201ENST00000441105 947 ntBASIC16.62■□□□□ 0.25
BRCA2P51587 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.62■□□□□ 0.25
BRCA2P51587 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.62■□□□□ 0.25
BRCA2P51587 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.62■□□□□ 0.25
BRCA2P51587 AC112504.1-201ENST00000623415 1841 ntBASIC16.62■□□□□ 0.25
BRCA2P51587 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC16.62■□□□□ 0.25
BRCA2P51587 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BRCA2P51587 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
BRCA2P51587 AC008741.2-201ENST00000612792 3115 ntBASIC16.61■□□□□ 0.25
BRCA2P51587 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BRCA2P51587 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BRCA2P51587 AC106827.1-201ENST00000366454 431 ntBASIC16.61■□□□□ 0.25
BRCA2P51587 TREHP1-201ENST00000531328 465 ntBASIC16.61■□□□□ 0.25
BRCA2P51587 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC16.61■□□□□ 0.25
BRCA2P51587 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC16.61■□□□□ 0.25
BRCA2P51587 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC16.61■□□□□ 0.25
BRCA2P51587 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC16.61■□□□□ 0.25
BRCA2P51587 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.61■□□□□ 0.25
BRCA2P51587 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.61■□□□□ 0.25
BRCA2P51587 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.61■□□□□ 0.25
BRCA2P51587 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.61■□□□□ 0.25
BRCA2P51587 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
BRCA2P51587 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BRCA2P51587 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
BRCA2P51587 AL807761.2-201ENST00000422849 729 ntBASIC16.61■□□□□ 0.25
BRCA2P51587 PMEL-214ENST00000550447 901 ntTSL 3 BASIC16.61■□□□□ 0.25
BRCA2P51587 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC16.61■□□□□ 0.25
BRCA2P51587 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC16.61■□□□□ 0.25
BRCA2P51587 AC002472.3-201ENST00000640124 621 ntBASIC16.61■□□□□ 0.25
BRCA2P51587 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
BRCA2P51587 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BRCA2P51587 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BRCA2P51587 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
BRCA2P51587 FRMPD2B-201ENST00000431305 1347 ntBASIC16.61■□□□□ 0.25
BRCA2P51587 RN7SKP230-201ENST00000365642 335 ntBASIC16.61■□□□□ 0.25
BRCA2P51587 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
BRCA2P51587 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BRCA2P51587 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC16.61■□□□□ 0.25
BRCA2P51587 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BRCA2P51587 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC16.61■□□□□ 0.25
BRCA2P51587 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BRCA2P51587 AC009884.2-201ENST00000603110 324 ntBASIC16.61■□□□□ 0.25
BRCA2P51587 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BRCA2P51587 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BRCA2P51587 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BRCA2P51587 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
BRCA2P51587 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BRCA2P51587 AL138725.1-201ENST00000407347 1314 ntBASIC16.6■□□□□ 0.25
BRCA2P51587 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BRCA2P51587 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BRCA2P51587 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BRCA2P51587 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
BRCA2P51587 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BRCA2P51587 AREG-202ENST00000502307 956 ntTSL 5 BASIC16.6■□□□□ 0.25
BRCA2P51587 AP003398.1-201ENST00000531124 318 ntBASIC16.6■□□□□ 0.25
BRCA2P51587 MIR2392-201ENST00000584881 84 ntBASIC16.6■□□□□ 0.25
BRCA2P51587 AC087392.5-201ENST00000612517 489 ntBASIC16.6■□□□□ 0.25
BRCA2P51587 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.6■□□□□ 0.25
BRCA2P51587 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BRCA2P51587 AC006504.5-208ENST00000588784 2401 ntBASIC16.6■□□□□ 0.25
BRCA2P51587 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
BRCA2P51587 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BRCA2P51587 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
BRCA2P51587 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.6■□□□□ 0.25
BRCA2P51587 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BRCA2P51587 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BRCA2P51587 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC16.6■□□□□ 0.25
BRCA2P51587 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BRCA2P51587 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.6■□□□□ 0.25
BRCA2P51587 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
BRCA2P51587 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BRCA2P51587 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BRCA2P51587 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BRCA2P51587 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.6■□□□□ 0.25
BRCA2P51587 AL645933.1-201ENST00000440087 609 ntBASIC16.6■□□□□ 0.25
BRCA2P51587 RN7SL81P-201ENST00000493781 261 ntBASIC16.6■□□□□ 0.25
BRCA2P51587 AC084752.1-201ENST00000509766 622 ntBASIC16.6■□□□□ 0.25
BRCA2P51587 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BRCA2P51587 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC16.6■□□□□ 0.25
BRCA2P51587 RN7SL470P-201ENST00000583069 259 ntBASIC16.6■□□□□ 0.25
BRCA2P51587 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.6■□□□□ 0.25
BRCA2P51587 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BRCA2P51587 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BRCA2P51587 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BRCA2P51587 AL109809.1-201ENST00000418979 1367 ntBASIC16.6■□□□□ 0.25
BRCA2P51587 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms