Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SNCAP37840 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.68□□□□□ -0.38
SNCAP37840 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.68□□□□□ -0.38
SNCAP37840 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNCAP37840 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNCAP37840 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.68□□□□□ -0.38
SNCAP37840 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
SNCAP37840 BNIP3P1-202ENST00000550043 1585 ntBASIC12.68□□□□□ -0.38
SNCAP37840 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNCAP37840 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
SNCAP37840 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNCAP37840 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SNCAP37840 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC12.68□□□□□ -0.38
SNCAP37840 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNCAP37840 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SNCAP37840 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.68□□□□□ -0.38
SNCAP37840 FLII-221ENST00000578558 2377 ntTSL 5 BASIC12.67□□□□□ -0.38
SNCAP37840 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNCAP37840 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SNCAP37840 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SNCAP37840 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.67□□□□□ -0.38
SNCAP37840 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNCAP37840 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC12.67□□□□□ -0.38
SNCAP37840 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SNCAP37840 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SNCAP37840 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SNCAP37840 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNCAP37840 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
SNCAP37840 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNCAP37840 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNCAP37840 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.67□□□□□ -0.38
SNCAP37840 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.67□□□□□ -0.38
SNCAP37840 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SNCAP37840 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNCAP37840 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC12.67□□□□□ -0.38
SNCAP37840 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SNCAP37840 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SNCAP37840 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNCAP37840 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
SNCAP37840 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.67□□□□□ -0.38
SNCAP37840 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
SNCAP37840 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
SNCAP37840 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNCAP37840 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SNCAP37840 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC12.67□□□□□ -0.38
SNCAP37840 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SNCAP37840 KRT18P2-201ENST00000447938 1258 ntBASIC12.67□□□□□ -0.38
SNCAP37840 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC12.67□□□□□ -0.38
SNCAP37840 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC12.67□□□□□ -0.38
SNCAP37840 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC12.67□□□□□ -0.38
SNCAP37840 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC12.67□□□□□ -0.38
SNCAP37840 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC12.67□□□□□ -0.38
SNCAP37840 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC12.67□□□□□ -0.38
SNCAP37840 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC12.67□□□□□ -0.38
SNCAP37840 AL138918.1-201ENST00000568306 659 ntBASIC12.67□□□□□ -0.38
SNCAP37840 AC061975.2-201ENST00000581722 295 ntBASIC12.67□□□□□ -0.38
SNCAP37840 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC12.67□□□□□ -0.38
SNCAP37840 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC12.67□□□□□ -0.38
SNCAP37840 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SNCAP37840 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC12.67□□□□□ -0.38
SNCAP37840 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC12.67□□□□□ -0.38
SNCAP37840 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC12.67□□□□□ -0.38
SNCAP37840 AC008267.7-201ENST00000624570 1194 ntBASIC12.67□□□□□ -0.38
SNCAP37840 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SNCAP37840 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNCAP37840 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNCAP37840 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SNCAP37840 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.67□□□□□ -0.38
SNCAP37840 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
SNCAP37840 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNCAP37840 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.67□□□□□ -0.38
SNCAP37840 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.67□□□□□ -0.38
SNCAP37840 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SNCAP37840 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNCAP37840 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SNCAP37840 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNCAP37840 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.67□□□□□ -0.38
SNCAP37840 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SNCAP37840 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.67□□□□□ -0.38
SNCAP37840 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNCAP37840 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNCAP37840 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.67□□□□□ -0.38
SNCAP37840 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SNCAP37840 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SNCAP37840 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SNCAP37840 AC089987.1-201ENST00000551654 2209 ntBASIC12.66□□□□□ -0.38
SNCAP37840 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SNCAP37840 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SNCAP37840 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SNCAP37840 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SNCAP37840 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
SNCAP37840 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.66□□□□□ -0.38
SNCAP37840 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SNCAP37840 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.66□□□□□ -0.38
SNCAP37840 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SNCAP37840 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SNCAP37840 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SNCAP37840 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SNCAP37840 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.66□□□□□ -0.38
SNCAP37840 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms