Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COPB2P35606 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
COPB2P35606 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
COPB2P35606 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.41■□□□□ 0.38
COPB2P35606 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COPB2P35606 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COPB2P35606 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
COPB2P35606 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
COPB2P35606 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.41■□□□□ 0.38
COPB2P35606 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.41■□□□□ 0.38
COPB2P35606 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
COPB2P35606 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COPB2P35606 MESTP3-201ENST00000503460 968 ntBASIC17.41■□□□□ 0.38
COPB2P35606 AL391280.1-201ENST00000506969 1062 ntBASIC17.41■□□□□ 0.38
COPB2P35606 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC17.41■□□□□ 0.38
COPB2P35606 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
COPB2P35606 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.41■□□□□ 0.38
COPB2P35606 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.41■□□□□ 0.38
COPB2P35606 AC138466.3-201ENST00000619983 221 ntBASIC17.41■□□□□ 0.38
COPB2P35606 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COPB2P35606 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.41■□□□□ 0.38
COPB2P35606 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COPB2P35606 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
COPB2P35606 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COPB2P35606 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.41■□□□□ 0.38
COPB2P35606 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COPB2P35606 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
COPB2P35606 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COPB2P35606 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
COPB2P35606 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
COPB2P35606 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
COPB2P35606 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COPB2P35606 AC055811.4-201ENST00000624039 1754 ntBASIC17.4■□□□□ 0.38
COPB2P35606 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COPB2P35606 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COPB2P35606 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COPB2P35606 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
COPB2P35606 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COPB2P35606 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COPB2P35606 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.4■□□□□ 0.38
COPB2P35606 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
COPB2P35606 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
COPB2P35606 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
COPB2P35606 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
COPB2P35606 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COPB2P35606 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.4■□□□□ 0.38
COPB2P35606 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COPB2P35606 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
COPB2P35606 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.4■□□□□ 0.38
COPB2P35606 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.4■□□□□ 0.38
COPB2P35606 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COPB2P35606 CHMP1AP1-201ENST00000445563 662 ntBASIC17.4■□□□□ 0.38
COPB2P35606 IGHJ2P-201ENST00000454480 60 ntBASIC17.4■□□□□ 0.38
COPB2P35606 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC17.4■□□□□ 0.38
COPB2P35606 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.4■□□□□ 0.38
COPB2P35606 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.4■□□□□ 0.38
COPB2P35606 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.4■□□□□ 0.38
COPB2P35606 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC17.4■□□□□ 0.38
COPB2P35606 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
COPB2P35606 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC17.4■□□□□ 0.38
COPB2P35606 AC018735.1-201ENST00000437208 1502 ntBASIC17.4■□□□□ 0.38
COPB2P35606 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
COPB2P35606 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
COPB2P35606 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
COPB2P35606 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.4■□□□□ 0.38
COPB2P35606 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COPB2P35606 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COPB2P35606 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
COPB2P35606 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COPB2P35606 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
COPB2P35606 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
COPB2P35606 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.39■□□□□ 0.38
COPB2P35606 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
COPB2P35606 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.39■□□□□ 0.38
COPB2P35606 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
COPB2P35606 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COPB2P35606 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COPB2P35606 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.39■□□□□ 0.37
COPB2P35606 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.39■□□□□ 0.37
COPB2P35606 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
COPB2P35606 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COPB2P35606 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COPB2P35606 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COPB2P35606 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COPB2P35606 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COPB2P35606 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COPB2P35606 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
COPB2P35606 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
COPB2P35606 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
COPB2P35606 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
COPB2P35606 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COPB2P35606 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
COPB2P35606 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.39■□□□□ 0.37
COPB2P35606 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
COPB2P35606 AL008707.1-201ENST00000422498 534 ntBASIC17.39■□□□□ 0.37
COPB2P35606 HLA-K-203ENST00000430151 1046 ntBASIC17.39■□□□□ 0.37
COPB2P35606 FNTAP2-201ENST00000430308 634 ntBASIC17.39■□□□□ 0.37
COPB2P35606 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.39■□□□□ 0.37
COPB2P35606 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.39■□□□□ 0.37
COPB2P35606 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms