Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RORAP35398 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.55□□□□□ -0.08
RORAP35398 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RORAP35398 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.55□□□□□ -0.08
RORAP35398 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.55□□□□□ -0.08
RORAP35398 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.55□□□□□ -0.08
RORAP35398 AC008687.7-202ENST00000637404 953 ntBASIC14.55□□□□□ -0.08
RORAP35398 PRSS30P-206ENST00000641773 873 ntBASIC14.55□□□□□ -0.08
RORAP35398 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
RORAP35398 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RORAP35398 AL365209.1-201ENST00000624418 6473 ntBASIC14.55□□□□□ -0.08
RORAP35398 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.55□□□□□ -0.08
RORAP35398 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.55□□□□□ -0.08
RORAP35398 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RORAP35398 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.55□□□□□ -0.08
RORAP35398 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RORAP35398 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RORAP35398 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
RORAP35398 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RORAP35398 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RORAP35398 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.55□□□□□ -0.08
RORAP35398 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.55□□□□□ -0.08
RORAP35398 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
RORAP35398 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
RORAP35398 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.55□□□□□ -0.08
RORAP35398 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.55□□□□□ -0.08
RORAP35398 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
RORAP35398 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RORAP35398 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RORAP35398 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RORAP35398 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RORAP35398 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
RORAP35398 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RORAP35398 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RORAP35398 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RORAP35398 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RORAP35398 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RORAP35398 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.54□□□□□ -0.08
RORAP35398 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RORAP35398 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RORAP35398 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RORAP35398 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RORAP35398 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RORAP35398 AC006001.1-201ENST00000325130 474 ntBASIC14.54□□□□□ -0.08
RORAP35398 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
RORAP35398 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.54□□□□□ -0.08
RORAP35398 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
RORAP35398 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.54□□□□□ -0.08
RORAP35398 NUS1P3-201ENST00000423502 862 ntBASIC14.54□□□□□ -0.08
RORAP35398 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.54□□□□□ -0.08
RORAP35398 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RORAP35398 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.54□□□□□ -0.08
RORAP35398 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.54□□□□□ -0.08
RORAP35398 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.54□□□□□ -0.08
RORAP35398 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.54□□□□□ -0.08
RORAP35398 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.54□□□□□ -0.08
RORAP35398 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RORAP35398 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.54□□□□□ -0.08
RORAP35398 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RORAP35398 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RORAP35398 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
RORAP35398 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.54□□□□□ -0.08
RORAP35398 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
RORAP35398 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.54□□□□□ -0.08
RORAP35398 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RORAP35398 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.54□□□□□ -0.08
RORAP35398 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RORAP35398 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RORAP35398 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RORAP35398 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.54□□□□□ -0.08
RORAP35398 AC087481.3-201ENST00000602886 1894 ntBASIC14.54□□□□□ -0.08
RORAP35398 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RORAP35398 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RORAP35398 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RORAP35398 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.54□□□□□ -0.08
RORAP35398 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RORAP35398 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RORAP35398 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RORAP35398 MIR600HG-201ENST00000449175 5984 ntBASIC14.53□□□□□ -0.08
RORAP35398 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RORAP35398 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RORAP35398 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
RORAP35398 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RORAP35398 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RORAP35398 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RORAP35398 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RORAP35398 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.53□□□□□ -0.08
RORAP35398 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RORAP35398 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RORAP35398 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.53□□□□□ -0.08
RORAP35398 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RORAP35398 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RORAP35398 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RORAP35398 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RORAP35398 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.53□□□□□ -0.08
RORAP35398 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RORAP35398 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.53□□□□□ -0.08
RORAP35398 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RORAP35398 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RORAP35398 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms