Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HOXC12P31275 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HOXC12P31275 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HOXC12P31275 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HOXC12P31275 C1QBPP1-201ENST00000400117 770 ntBASIC13.63□□□□□ -0.23
HOXC12P31275 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.63□□□□□ -0.23
HOXC12P31275 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HOXC12P31275 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.63□□□□□ -0.23
HOXC12P31275 USP32P1-208ENST00000506594 1164 ntBASIC13.63□□□□□ -0.23
HOXC12P31275 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
HOXC12P31275 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.63□□□□□ -0.23
HOXC12P31275 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.63□□□□□ -0.23
HOXC12P31275 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.63□□□□□ -0.23
HOXC12P31275 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.63□□□□□ -0.23
HOXC12P31275 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
HOXC12P31275 AC103810.3-201ENST00000583567 96 ntBASIC13.63□□□□□ -0.23
HOXC12P31275 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
HOXC12P31275 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.63□□□□□ -0.23
HOXC12P31275 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
HOXC12P31275 AC233724.13-201ENST00000598383 410 ntBASIC13.63□□□□□ -0.23
HOXC12P31275 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
HOXC12P31275 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.63□□□□□ -0.23
HOXC12P31275 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HOXC12P31275 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HOXC12P31275 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.63□□□□□ -0.23
HOXC12P31275 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
HOXC12P31275 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HOXC12P31275 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
HOXC12P31275 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HOXC12P31275 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HOXC12P31275 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HOXC12P31275 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
HOXC12P31275 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
HOXC12P31275 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HOXC12P31275 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
HOXC12P31275 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HOXC12P31275 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HOXC12P31275 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HOXC12P31275 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HOXC12P31275 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HOXC12P31275 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HOXC12P31275 AC022188.1-201ENST00000620960 1664 ntBASIC13.63□□□□□ -0.23
HOXC12P31275 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HOXC12P31275 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HOXC12P31275 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.62□□□□□ -0.23
HOXC12P31275 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HOXC12P31275 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HOXC12P31275 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.62□□□□□ -0.23
HOXC12P31275 AC018665.1-201ENST00000622927 1362 ntBASIC13.62□□□□□ -0.23
HOXC12P31275 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HOXC12P31275 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.62□□□□□ -0.23
HOXC12P31275 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.62□□□□□ -0.23
HOXC12P31275 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HOXC12P31275 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
HOXC12P31275 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
HOXC12P31275 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
HOXC12P31275 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HOXC12P31275 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HOXC12P31275 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
HOXC12P31275 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HOXC12P31275 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HOXC12P31275 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.62□□□□□ -0.23
HOXC12P31275 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.62□□□□□ -0.23
HOXC12P31275 AL355994.2-201ENST00000447882 704 ntBASIC13.62□□□□□ -0.23
HOXC12P31275 VDAC1P7-201ENST00000462417 847 ntBASIC13.62□□□□□ -0.23
HOXC12P31275 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.62□□□□□ -0.23
HOXC12P31275 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.62□□□□□ -0.23
HOXC12P31275 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HOXC12P31275 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HOXC12P31275 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.62□□□□□ -0.23
HOXC12P31275 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.62□□□□□ -0.23
HOXC12P31275 AL391069.4-201ENST00000609583 481 ntBASIC13.62□□□□□ -0.23
HOXC12P31275 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
HOXC12P31275 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.62□□□□□ -0.23
HOXC12P31275 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.62□□□□□ -0.23
HOXC12P31275 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HOXC12P31275 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HOXC12P31275 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HOXC12P31275 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.62□□□□□ -0.23
HOXC12P31275 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HOXC12P31275 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.62□□□□□ -0.23
HOXC12P31275 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.62□□□□□ -0.23
HOXC12P31275 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.62□□□□□ -0.23
HOXC12P31275 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.62□□□□□ -0.23
HOXC12P31275 AC093525.8-201ENST00000624099 1342 ntBASIC13.62□□□□□ -0.23
HOXC12P31275 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HOXC12P31275 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
HOXC12P31275 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HOXC12P31275 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
HOXC12P31275 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HOXC12P31275 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HOXC12P31275 AC008741.2-201ENST00000612792 3115 ntBASIC13.62□□□□□ -0.23
HOXC12P31275 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HOXC12P31275 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HOXC12P31275 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.61□□□□□ -0.23
HOXC12P31275 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HOXC12P31275 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
HOXC12P31275 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HOXC12P31275 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.61□□□□□ -0.23
HOXC12P31275 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms