Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.08□□□□□ -0.16
SHC1P29353 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHC1P29353 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.08□□□□□ -0.16
SHC1P29353 AC093004.1-201ENST00000508850 424 ntBASIC14.08□□□□□ -0.16
SHC1P29353 AC055876.2-201ENST00000531834 546 ntBASIC14.08□□□□□ -0.16
SHC1P29353 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.08□□□□□ -0.16
SHC1P29353 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.08□□□□□ -0.16
SHC1P29353 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
SHC1P29353 RARRES2P5-201ENST00000564013 466 ntBASIC14.08□□□□□ -0.16
SHC1P29353 AC015910.1-201ENST00000579400 975 ntBASIC14.08□□□□□ -0.16
SHC1P29353 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.08□□□□□ -0.16
SHC1P29353 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.08□□□□□ -0.16
SHC1P29353 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SHC1P29353 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SHC1P29353 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.08□□□□□ -0.16
SHC1P29353 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
SHC1P29353 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.08□□□□□ -0.16
SHC1P29353 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.08□□□□□ -0.16
SHC1P29353 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHC1P29353 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.08□□□□□ -0.16
SHC1P29353 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHC1P29353 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHC1P29353 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.08□□□□□ -0.16
SHC1P29353 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SHC1P29353 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHC1P29353 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHC1P29353 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHC1P29353 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHC1P29353 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SHC1P29353 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHC1P29353 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SHC1P29353 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SHC1P29353 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.08□□□□□ -0.16
SHC1P29353 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SHC1P29353 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHC1P29353 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.07□□□□□ -0.16
SHC1P29353 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHC1P29353 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.07□□□□□ -0.16
SHC1P29353 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHC1P29353 AC138969.3-201ENST00000546612 1459 ntBASIC14.07□□□□□ -0.16
SHC1P29353 AC138932.2-201ENST00000548268 1459 ntBASIC14.07□□□□□ -0.16
SHC1P29353 AC126755.4-201ENST00000549796 1459 ntBASIC14.07□□□□□ -0.16
SHC1P29353 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHC1P29353 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
SHC1P29353 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHC1P29353 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.07□□□□□ -0.16
SHC1P29353 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
SHC1P29353 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SHC1P29353 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
SHC1P29353 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.07□□□□□ -0.16
SHC1P29353 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHC1P29353 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SHC1P29353 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.07□□□□□ -0.16
SHC1P29353 DFFBP1-201ENST00000433250 979 ntBASIC14.07□□□□□ -0.16
SHC1P29353 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHC1P29353 KRT18P43-201ENST00000469825 1281 ntBASIC14.07□□□□□ -0.16
SHC1P29353 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.07□□□□□ -0.16
SHC1P29353 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.07□□□□□ -0.16
SHC1P29353 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SHC1P29353 WASH4P-201ENST00000564273 1246 ntBASIC14.07□□□□□ -0.16
SHC1P29353 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.07□□□□□ -0.16
SHC1P29353 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.07□□□□□ -0.16
SHC1P29353 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SHC1P29353 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SHC1P29353 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHC1P29353 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHC1P29353 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHC1P29353 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SHC1P29353 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHC1P29353 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHC1P29353 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SHC1P29353 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SHC1P29353 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SHC1P29353 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SHC1P29353 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.07□□□□□ -0.16
SHC1P29353 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SHC1P29353 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.07□□□□□ -0.16
SHC1P29353 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.07□□□□□ -0.16
SHC1P29353 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.07□□□□□ -0.16
SHC1P29353 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.07□□□□□ -0.16
SHC1P29353 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.07□□□□□ -0.16
SHC1P29353 KRT8P44-201ENST00000441609 1350 ntBASIC14.07□□□□□ -0.16
SHC1P29353 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SHC1P29353 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.07□□□□□ -0.16
SHC1P29353 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.06□□□□□ -0.16
SHC1P29353 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.06□□□□□ -0.16
SHC1P29353 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SHC1P29353 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SHC1P29353 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.06□□□□□ -0.16
SHC1P29353 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHC1P29353 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHC1P29353 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHC1P29353 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.06□□□□□ -0.16
SHC1P29353 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.06□□□□□ -0.16
SHC1P29353 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.06□□□□□ -0.16
SHC1P29353 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHC1P29353 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHC1P29353 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHC1P29353 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHC1P29353 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms