Protein–RNA interactions for Protein: P26992

CNTFR, Ciliary neurotrophic factor receptor subunit alpha, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFRP26992 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CNTFRP26992 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC12.34□□□□□ -0.43
CNTFRP26992 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CNTFRP26992 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CNTFRP26992 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CNTFRP26992 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CNTFRP26992 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CNTFRP26992 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CNTFRP26992 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.34□□□□□ -0.43
CNTFRP26992 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CNTFRP26992 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CNTFRP26992 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.34□□□□□ -0.43
CNTFRP26992 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CNTFRP26992 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CNTFRP26992 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CNTFRP26992 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CNTFRP26992 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
CNTFRP26992 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.34□□□□□ -0.43
CNTFRP26992 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CNTFRP26992 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.34□□□□□ -0.43
CNTFRP26992 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.34□□□□□ -0.43
CNTFRP26992 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.34□□□□□ -0.43
CNTFRP26992 CHCHD2P3-201ENST00000603038 451 ntBASIC12.34□□□□□ -0.43
CNTFRP26992 AC107373.2-201ENST00000607735 490 ntBASIC12.34□□□□□ -0.43
CNTFRP26992 AL662799.1-202ENST00000614205 422 ntBASIC12.34□□□□□ -0.43
CNTFRP26992 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.34□□□□□ -0.43
CNTFRP26992 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.34□□□□□ -0.43
CNTFRP26992 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
CNTFRP26992 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CNTFRP26992 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC12.34□□□□□ -0.43
CNTFRP26992 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CNTFRP26992 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CNTFRP26992 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CNTFRP26992 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CNTFRP26992 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CNTFRP26992 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CNTFRP26992 DRD5P1-201ENST00000456605 1438 ntBASIC12.34□□□□□ -0.43
CNTFRP26992 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CNTFRP26992 CICP24-201ENST00000605464 2705 ntBASIC12.34□□□□□ -0.43
CNTFRP26992 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CNTFRP26992 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CNTFRP26992 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CNTFRP26992 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CNTFRP26992 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
CNTFRP26992 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CNTFRP26992 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CNTFRP26992 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CNTFRP26992 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CNTFRP26992 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CNTFRP26992 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CNTFRP26992 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CNTFRP26992 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CNTFRP26992 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CNTFRP26992 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CNTFRP26992 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CNTFRP26992 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CNTFRP26992 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CNTFRP26992 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CNTFRP26992 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CNTFRP26992 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CNTFRP26992 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
CNTFRP26992 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.33□□□□□ -0.43
CNTFRP26992 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.33□□□□□ -0.43
CNTFRP26992 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CNTFRP26992 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CNTFRP26992 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CNTFRP26992 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CNTFRP26992 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CNTFRP26992 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CNTFRP26992 ZBED1P1-201ENST00000502364 1930 ntBASIC12.33□□□□□ -0.44
CNTFRP26992 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CNTFRP26992 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CNTFRP26992 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC12.33□□□□□ -0.44
CNTFRP26992 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CNTFRP26992 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.33□□□□□ -0.44
CNTFRP26992 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
CNTFRP26992 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CNTFRP26992 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CNTFRP26992 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CNTFRP26992 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.33□□□□□ -0.44
CNTFRP26992 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CNTFRP26992 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CNTFRP26992 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CNTFRP26992 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CNTFRP26992 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CNTFRP26992 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC12.33□□□□□ -0.44
CNTFRP26992 GOLGA6L11P-201ENST00000417252 1298 ntBASIC12.33□□□□□ -0.44
CNTFRP26992 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.33□□□□□ -0.44
CNTFRP26992 FAM207CP-201ENST00000443486 507 ntBASIC12.33□□□□□ -0.44
CNTFRP26992 OARD1-208ENST00000469104 704 ntTSL 2 BASIC12.33□□□□□ -0.44
CNTFRP26992 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.33□□□□□ -0.44
CNTFRP26992 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CNTFRP26992 AC123567.1-201ENST00000548294 1261 ntBASIC12.33□□□□□ -0.44
CNTFRP26992 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.33□□□□□ -0.44
CNTFRP26992 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC12.33□□□□□ -0.44
CNTFRP26992 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
CNTFRP26992 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.33□□□□□ -0.44
CNTFRP26992 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.33□□□□□ -0.44
CNTFRP26992 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.33□□□□□ -0.44
CNTFRP26992 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms