Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PTPN3P26045 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PTPN3P26045 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.6■□□□□ 0.09
PTPN3P26045 AL391825.1-201ENST00000457671 1364 ntBASIC15.6■□□□□ 0.09
PTPN3P26045 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN3P26045 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTPN3P26045 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.6■□□□□ 0.09
PTPN3P26045 REXO1L5P-201ENST00000622260 2098 ntBASIC15.59■□□□□ 0.09
PTPN3P26045 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN3P26045 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
PTPN3P26045 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.59■□□□□ 0.09
PTPN3P26045 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN3P26045 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
PTPN3P26045 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
PTPN3P26045 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
PTPN3P26045 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN3P26045 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN3P26045 MIR600HG-201ENST00000449175 5984 ntBASIC15.59■□□□□ 0.09
PTPN3P26045 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
PTPN3P26045 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
PTPN3P26045 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.59■□□□□ 0.09
PTPN3P26045 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN3P26045 CICP14-201ENST00000629111 2732 ntBASIC15.59■□□□□ 0.09
PTPN3P26045 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN3P26045 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN3P26045 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN3P26045 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN3P26045 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN3P26045 AC236430.1-201ENST00000402231 743 ntBASIC15.59■□□□□ 0.09
PTPN3P26045 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.59■□□□□ 0.09
PTPN3P26045 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.59■□□□□ 0.09
PTPN3P26045 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN3P26045 API5-211ENST00000534695 560 ntTSL 5 BASIC15.59■□□□□ 0.09
PTPN3P26045 AC092552.1-201ENST00000547243 906 ntBASIC15.59■□□□□ 0.09
PTPN3P26045 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN3P26045 AC124283.3-201ENST00000570869 594 ntBASIC15.59■□□□□ 0.09
PTPN3P26045 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.59■□□□□ 0.09
PTPN3P26045 AL355385.1-201ENST00000606123 409 ntBASIC15.59■□□□□ 0.09
PTPN3P26045 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.59■□□□□ 0.09
PTPN3P26045 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN3P26045 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN3P26045 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.59■□□□□ 0.09
PTPN3P26045 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.59■□□□□ 0.09
PTPN3P26045 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN3P26045 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.59■□□□□ 0.09
PTPN3P26045 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN3P26045 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN3P26045 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN3P26045 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.59■□□□□ 0.09
PTPN3P26045 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN3P26045 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.59■□□□□ 0.09
PTPN3P26045 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
PTPN3P26045 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.59■□□□□ 0.09
PTPN3P26045 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.59■□□□□ 0.09
PTPN3P26045 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.59■□□□□ 0.09
PTPN3P26045 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN3P26045 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN3P26045 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PTPN3P26045 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTPN3P26045 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
PTPN3P26045 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
PTPN3P26045 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PTPN3P26045 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PTPN3P26045 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.09
PTPN3P26045 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.58■□□□□ 0.09
PTPN3P26045 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.58■□□□□ 0.09
PTPN3P26045 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.58■□□□□ 0.08
PTPN3P26045 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PTPN3P26045 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.58■□□□□ 0.08
PTPN3P26045 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.58■□□□□ 0.08
PTPN3P26045 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.58■□□□□ 0.08
PTPN3P26045 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PTPN3P26045 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PTPN3P26045 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PTPN3P26045 AL645937.2-201ENST00000396808 931 ntBASIC15.58■□□□□ 0.08
PTPN3P26045 C1QBPP1-201ENST00000400117 770 ntBASIC15.58■□□□□ 0.08
PTPN3P26045 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.58■□□□□ 0.08
PTPN3P26045 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.58■□□□□ 0.08
PTPN3P26045 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.58■□□□□ 0.08
PTPN3P26045 AC002472.2-201ENST00000442739 958 ntBASIC15.58■□□□□ 0.08
PTPN3P26045 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.58■□□□□ 0.08
PTPN3P26045 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
PTPN3P26045 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.58■□□□□ 0.08
PTPN3P26045 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.58■□□□□ 0.08
PTPN3P26045 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.58■□□□□ 0.08
PTPN3P26045 AL359711.2-201ENST00000563105 872 ntBASIC15.58■□□□□ 0.08
PTPN3P26045 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.58■□□□□ 0.08
PTPN3P26045 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.58■□□□□ 0.08
PTPN3P26045 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
PTPN3P26045 AC007431.3-201ENST00000623221 587 ntBASIC15.58■□□□□ 0.08
PTPN3P26045 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PTPN3P26045 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PTPN3P26045 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
PTPN3P26045 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PTPN3P26045 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.58■□□□□ 0.08
PTPN3P26045 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PTPN3P26045 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.58■□□□□ 0.08
PTPN3P26045 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
PTPN3P26045 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.58■□□□□ 0.08
PTPN3P26045 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms