Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
VAMP1P23763 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
VAMP1P23763 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
VAMP1P23763 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
VAMP1P23763 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VAMP1P23763 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
VAMP1P23763 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VAMP1P23763 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VAMP1P23763 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
VAMP1P23763 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VAMP1P23763 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VAMP1P23763 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
VAMP1P23763 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VAMP1P23763 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
VAMP1P23763 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VAMP1P23763 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VAMP1P23763 AC092135.3-201ENST00000624151 1846 ntBASIC13.02□□□□□ -0.33
VAMP1P23763 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VAMP1P23763 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VAMP1P23763 AL118505.1-201ENST00000619370 1932 ntBASIC13.01□□□□□ -0.33
VAMP1P23763 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VAMP1P23763 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
VAMP1P23763 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
VAMP1P23763 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
VAMP1P23763 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
VAMP1P23763 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
VAMP1P23763 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VAMP1P23763 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
VAMP1P23763 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
VAMP1P23763 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
VAMP1P23763 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
VAMP1P23763 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
VAMP1P23763 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VAMP1P23763 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.01□□□□□ -0.33
VAMP1P23763 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
VAMP1P23763 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VAMP1P23763 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13.01□□□□□ -0.33
VAMP1P23763 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
VAMP1P23763 AC004987.2-201ENST00000395959 1148 ntBASIC13.01□□□□□ -0.33
VAMP1P23763 RPL5P21-201ENST00000404620 815 ntBASIC13.01□□□□□ -0.33
VAMP1P23763 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VAMP1P23763 ATP5G2P1-201ENST00000433580 426 ntBASIC13.01□□□□□ -0.33
VAMP1P23763 RPS2P1-201ENST00000434010 821 ntBASIC13.01□□□□□ -0.33
VAMP1P23763 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC13.01□□□□□ -0.33
VAMP1P23763 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
VAMP1P23763 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC13.01□□□□□ -0.33
VAMP1P23763 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC13.01□□□□□ -0.33
VAMP1P23763 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VAMP1P23763 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VAMP1P23763 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VAMP1P23763 AL356488.2-201ENST00000602755 427 ntBASIC13.01□□□□□ -0.33
VAMP1P23763 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC13.01□□□□□ -0.33
VAMP1P23763 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
VAMP1P23763 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
VAMP1P23763 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VAMP1P23763 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.01□□□□□ -0.33
VAMP1P23763 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VAMP1P23763 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC13.01□□□□□ -0.33
VAMP1P23763 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.01□□□□□ -0.33
VAMP1P23763 SON-203ENST00000381679 7860 ntTSL 5 BASIC13.01□□□□□ -0.33
VAMP1P23763 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.01□□□□□ -0.33
VAMP1P23763 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.01□□□□□ -0.33
VAMP1P23763 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC13.01□□□□□ -0.33
VAMP1P23763 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VAMP1P23763 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
VAMP1P23763 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VAMP1P23763 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.01□□□□□ -0.33
VAMP1P23763 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VAMP1P23763 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VAMP1P23763 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VAMP1P23763 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
VAMP1P23763 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VAMP1P23763 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VAMP1P23763 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VAMP1P23763 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VAMP1P23763 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
VAMP1P23763 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
VAMP1P23763 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
VAMP1P23763 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
VAMP1P23763 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13□□□□□ -0.33
VAMP1P23763 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VAMP1P23763 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VAMP1P23763 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13□□□□□ -0.33
VAMP1P23763 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
VAMP1P23763 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
VAMP1P23763 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
VAMP1P23763 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
VAMP1P23763 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
VAMP1P23763 CICP17-201ENST00000418553 2377 ntBASIC13□□□□□ -0.33
VAMP1P23763 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
VAMP1P23763 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13□□□□□ -0.33
VAMP1P23763 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13□□□□□ -0.33
VAMP1P23763 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
VAMP1P23763 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13□□□□□ -0.33
VAMP1P23763 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC13□□□□□ -0.33
VAMP1P23763 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13□□□□□ -0.33
VAMP1P23763 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VAMP1P23763 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13□□□□□ -0.33
VAMP1P23763 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13□□□□□ -0.33
VAMP1P23763 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms