Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RFX1P22670 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFX1P22670 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFX1P22670 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.69■□□□□ 0.26
RFX1P22670 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.69■□□□□ 0.26
RFX1P22670 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
RFX1P22670 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFX1P22670 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RFX1P22670 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFX1P22670 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RFX1P22670 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFX1P22670 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.68■□□□□ 0.26
RFX1P22670 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFX1P22670 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFX1P22670 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.68■□□□□ 0.26
RFX1P22670 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFX1P22670 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RFX1P22670 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFX1P22670 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.68■□□□□ 0.26
RFX1P22670 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RFX1P22670 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RFX1P22670 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.68■□□□□ 0.26
RFX1P22670 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RFX1P22670 BNIP3P42-201ENST00000454982 569 ntBASIC16.68■□□□□ 0.26
RFX1P22670 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RFX1P22670 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.68■□□□□ 0.26
RFX1P22670 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.68■□□□□ 0.26
RFX1P22670 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.68■□□□□ 0.26
RFX1P22670 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RFX1P22670 MIR4538-201ENST00000581377 78 ntBASIC16.68■□□□□ 0.26
RFX1P22670 BNIP3P29-201ENST00000598302 571 ntBASIC16.68■□□□□ 0.26
RFX1P22670 AC011447.5-201ENST00000616168 564 ntBASIC16.68■□□□□ 0.26
RFX1P22670 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFX1P22670 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RFX1P22670 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RFX1P22670 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFX1P22670 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.68■□□□□ 0.26
RFX1P22670 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.68■□□□□ 0.26
RFX1P22670 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
RFX1P22670 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RFX1P22670 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFX1P22670 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFX1P22670 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
RFX1P22670 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFX1P22670 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RFX1P22670 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFX1P22670 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RFX1P22670 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFX1P22670 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFX1P22670 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.68■□□□□ 0.26
RFX1P22670 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFX1P22670 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
RFX1P22670 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFX1P22670 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.67■□□□□ 0.26
RFX1P22670 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFX1P22670 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFX1P22670 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFX1P22670 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFX1P22670 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFX1P22670 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFX1P22670 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.67■□□□□ 0.26
RFX1P22670 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFX1P22670 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFX1P22670 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFX1P22670 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.67■□□□□ 0.26
RFX1P22670 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.67■□□□□ 0.26
RFX1P22670 AC120057.1-201ENST00000483947 663 ntBASIC16.67■□□□□ 0.26
RFX1P22670 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.67■□□□□ 0.26
RFX1P22670 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.67■□□□□ 0.26
RFX1P22670 AC008735.3-201ENST00000596646 500 ntBASIC16.67■□□□□ 0.26
RFX1P22670 GPR182-203ENST00000622922 591 ntBASIC16.67■□□□□ 0.26
RFX1P22670 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RFX1P22670 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.67■□□□□ 0.26
RFX1P22670 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.67■□□□□ 0.26
RFX1P22670 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RFX1P22670 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFX1P22670 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFX1P22670 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.67■□□□□ 0.26
RFX1P22670 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.67■□□□□ 0.26
RFX1P22670 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFX1P22670 AC023824.1-201ENST00000562945 2975 ntBASIC16.67■□□□□ 0.26
RFX1P22670 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RFX1P22670 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFX1P22670 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFX1P22670 CLK3P2-201ENST00000427566 1453 ntBASIC16.67■□□□□ 0.26
RFX1P22670 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RFX1P22670 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFX1P22670 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFX1P22670 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFX1P22670 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RFX1P22670 REXO1L2P-201ENST00000425429 2069 ntBASIC16.66■□□□□ 0.26
RFX1P22670 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
RFX1P22670 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFX1P22670 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFX1P22670 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RFX1P22670 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RFX1P22670 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.66■□□□□ 0.26
RFX1P22670 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RFX1P22670 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RFX1P22670 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms