Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
MSR1P21757 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
MSR1P21757 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.56□□□□□ -0.24
MSR1P21757 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.56□□□□□ -0.24
MSR1P21757 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.56□□□□□ -0.24
MSR1P21757 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MSR1P21757 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
MSR1P21757 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MSR1P21757 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
MSR1P21757 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
MSR1P21757 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
MSR1P21757 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MSR1P21757 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
MSR1P21757 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.56□□□□□ -0.24
MSR1P21757 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MSR1P21757 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
MSR1P21757 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.55□□□□□ -0.24
MSR1P21757 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
MSR1P21757 AP000845.1-201ENST00000581677 2131 ntBASIC13.55□□□□□ -0.24
MSR1P21757 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MSR1P21757 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
MSR1P21757 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
MSR1P21757 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
MSR1P21757 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
MSR1P21757 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MSR1P21757 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MSR1P21757 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
MSR1P21757 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.55□□□□□ -0.24
MSR1P21757 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
MSR1P21757 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
MSR1P21757 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MSR1P21757 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
MSR1P21757 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.55□□□□□ -0.24
MSR1P21757 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.55□□□□□ -0.24
MSR1P21757 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
MSR1P21757 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
MSR1P21757 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
MSR1P21757 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.55□□□□□ -0.24
MSR1P21757 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
MSR1P21757 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.55□□□□□ -0.24
MSR1P21757 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.55□□□□□ -0.24
MSR1P21757 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
MSR1P21757 RPL13AP25-201ENST00000484130 612 ntBASIC13.55□□□□□ -0.24
MSR1P21757 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
MSR1P21757 AC004066.1-201ENST00000502488 802 ntBASIC13.55□□□□□ -0.24
MSR1P21757 AC093004.1-201ENST00000508850 424 ntBASIC13.55□□□□□ -0.24
MSR1P21757 AC023310.3-201ENST00000557027 670 ntBASIC13.55□□□□□ -0.24
MSR1P21757 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
MSR1P21757 AC100756.1-201ENST00000562736 682 ntBASIC13.55□□□□□ -0.24
MSR1P21757 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.55□□□□□ -0.24
MSR1P21757 AC138749.3-201ENST00000567691 622 ntBASIC13.55□□□□□ -0.24
MSR1P21757 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
MSR1P21757 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
MSR1P21757 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.55□□□□□ -0.24
MSR1P21757 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.55□□□□□ -0.24
MSR1P21757 AC116165.1-201ENST00000611806 668 ntBASIC13.55□□□□□ -0.24
MSR1P21757 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.55□□□□□ -0.24
MSR1P21757 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
MSR1P21757 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.55□□□□□ -0.24
MSR1P21757 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.55□□□□□ -0.24
MSR1P21757 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
MSR1P21757 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
MSR1P21757 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.55□□□□□ -0.24
MSR1P21757 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MSR1P21757 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.55□□□□□ -0.24
MSR1P21757 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
MSR1P21757 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
MSR1P21757 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.55□□□□□ -0.24
MSR1P21757 LINC00528-201ENST00000600723 2160 ntBASIC13.55□□□□□ -0.24
MSR1P21757 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MSR1P21757 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
MSR1P21757 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
MSR1P21757 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
MSR1P21757 LINC01101-201ENST00000622953 1884 ntBASIC13.55□□□□□ -0.24
MSR1P21757 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
MSR1P21757 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
MSR1P21757 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
MSR1P21757 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.54□□□□□ -0.24
MSR1P21757 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
MSR1P21757 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
MSR1P21757 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.54□□□□□ -0.24
MSR1P21757 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
MSR1P21757 AC023824.1-201ENST00000562945 2975 ntBASIC13.54□□□□□ -0.24
MSR1P21757 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.54□□□□□ -0.24
MSR1P21757 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
MSR1P21757 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
MSR1P21757 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
MSR1P21757 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.54□□□□□ -0.24
MSR1P21757 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
MSR1P21757 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
MSR1P21757 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
MSR1P21757 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
MSR1P21757 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
MSR1P21757 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
MSR1P21757 MIR770-201ENST00000390219 98 ntBASIC13.54□□□□□ -0.24
MSR1P21757 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
MSR1P21757 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.54□□□□□ -0.24
MSR1P21757 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.54□□□□□ -0.24
MSR1P21757 RN7SL399P-201ENST00000471648 279 ntBASIC13.54□□□□□ -0.24
MSR1P21757 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms