Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.51□□□□□ -0.09
NCK1P16333 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NCK1P16333 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NCK1P16333 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.51□□□□□ -0.09
NCK1P16333 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NCK1P16333 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
NCK1P16333 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NCK1P16333 AC152010.1-201ENST00000415779 2006 ntBASIC14.51□□□□□ -0.09
NCK1P16333 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
NCK1P16333 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.51□□□□□ -0.09
NCK1P16333 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.51□□□□□ -0.09
NCK1P16333 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NCK1P16333 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NCK1P16333 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
NCK1P16333 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NCK1P16333 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
NCK1P16333 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
NCK1P16333 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NCK1P16333 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NCK1P16333 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.51□□□□□ -0.09
NCK1P16333 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NCK1P16333 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
NCK1P16333 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NCK1P16333 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
NCK1P16333 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.51□□□□□ -0.09
NCK1P16333 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.51□□□□□ -0.09
NCK1P16333 TIMM8BP1-201ENST00000452384 211 ntBASIC14.51□□□□□ -0.09
NCK1P16333 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NCK1P16333 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.09
NCK1P16333 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NCK1P16333 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.51□□□□□ -0.09
NCK1P16333 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.51□□□□□ -0.09
NCK1P16333 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NCK1P16333 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
NCK1P16333 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NCK1P16333 AC107918.4-201ENST00000641966 3141 ntBASIC14.51□□□□□ -0.09
NCK1P16333 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.51□□□□□ -0.09
NCK1P16333 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NCK1P16333 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
NCK1P16333 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
NCK1P16333 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.51□□□□□ -0.09
NCK1P16333 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
NCK1P16333 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NCK1P16333 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NCK1P16333 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NCK1P16333 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
NCK1P16333 AC012508.2-201ENST00000567613 1472 ntBASIC14.5□□□□□ -0.09
NCK1P16333 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
NCK1P16333 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NCK1P16333 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NCK1P16333 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.5□□□□□ -0.09
NCK1P16333 AC092135.3-201ENST00000624151 1846 ntBASIC14.5□□□□□ -0.09
NCK1P16333 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NCK1P16333 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NCK1P16333 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NCK1P16333 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
NCK1P16333 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NCK1P16333 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.5□□□□□ -0.09
NCK1P16333 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NCK1P16333 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NCK1P16333 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NCK1P16333 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NCK1P16333 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NCK1P16333 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.5□□□□□ -0.09
NCK1P16333 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.5□□□□□ -0.09
NCK1P16333 RNA5SP416-201ENST00000516838 111 ntBASIC14.5□□□□□ -0.09
NCK1P16333 BANF1P1-201ENST00000553684 263 ntBASIC14.5□□□□□ -0.09
NCK1P16333 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.5□□□□□ -0.09
NCK1P16333 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.5□□□□□ -0.09
NCK1P16333 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NCK1P16333 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.5□□□□□ -0.09
NCK1P16333 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.5□□□□□ -0.09
NCK1P16333 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.5□□□□□ -0.09
NCK1P16333 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
NCK1P16333 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NCK1P16333 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
NCK1P16333 BEND3P1-201ENST00000421591 1944 ntBASIC14.5□□□□□ -0.09
NCK1P16333 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NCK1P16333 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
NCK1P16333 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NCK1P16333 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
NCK1P16333 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NCK1P16333 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.5□□□□□ -0.09
NCK1P16333 AC138969.3-201ENST00000546612 1459 ntBASIC14.5□□□□□ -0.09
NCK1P16333 AC138932.2-201ENST00000548268 1459 ntBASIC14.5□□□□□ -0.09
NCK1P16333 AC126755.4-201ENST00000549796 1459 ntBASIC14.5□□□□□ -0.09
NCK1P16333 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
NCK1P16333 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.5□□□□□ -0.09
NCK1P16333 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.5□□□□□ -0.09
NCK1P16333 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NCK1P16333 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NCK1P16333 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NCK1P16333 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NCK1P16333 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.49□□□□□ -0.09
NCK1P16333 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NCK1P16333 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.49□□□□□ -0.09
NCK1P16333 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
NCK1P16333 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.49□□□□□ -0.09
NCK1P16333 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NCK1P16333 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms