Protein–RNA interactions for Protein: P16144

ITGB4, Integrin beta-4, humanhuman

Predictions only

Length 1,822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4P16144 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ITGB4P16144 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ITGB4P16144 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ITGB4P16144 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.01■□□□□ 0.63
ITGB4P16144 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC19.01■□□□□ 0.63
ITGB4P16144 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ITGB4P16144 HPGD-203ENST00000422112 805 ntTSL 2 BASIC19.01■□□□□ 0.63
ITGB4P16144 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
ITGB4P16144 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC19.01■□□□□ 0.63
ITGB4P16144 MIR5196-201ENST00000578146 115 ntBASIC19.01■□□□□ 0.63
ITGB4P16144 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
ITGB4P16144 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
ITGB4P16144 AL132780.4-201ENST00000624870 1135 ntBASIC19.01■□□□□ 0.63
ITGB4P16144 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ITGB4P16144 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
ITGB4P16144 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ITGB4P16144 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ITGB4P16144 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC19.01■□□□□ 0.63
ITGB4P16144 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC19.01■□□□□ 0.63
ITGB4P16144 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ITGB4P16144 AC026691.1-201ENST00000602502 2017 ntBASIC19.01■□□□□ 0.63
ITGB4P16144 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ITGB4P16144 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ITGB4P16144 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ITGB4P16144 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC19.01■□□□□ 0.63
ITGB4P16144 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
ITGB4P16144 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC19.01■□□□□ 0.63
ITGB4P16144 R3HDM2P2-201ENST00000401880 2116 ntBASIC19.01■□□□□ 0.63
ITGB4P16144 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ITGB4P16144 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ITGB4P16144 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC19.01■□□□□ 0.63
ITGB4P16144 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ITGB4P16144 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ITGB4P16144 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
ITGB4P16144 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC19■□□□□ 0.63
ITGB4P16144 HIST2H2BA-201ENST00000412169 381 ntBASIC19■□□□□ 0.63
ITGB4P16144 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC19■□□□□ 0.63
ITGB4P16144 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC19■□□□□ 0.63
ITGB4P16144 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC19■□□□□ 0.63
ITGB4P16144 CD164-210ENST00000512821 964 ntTSL 2 BASIC19■□□□□ 0.63
ITGB4P16144 AC114947.1-202ENST00000514136 344 ntBASIC19■□□□□ 0.63
ITGB4P16144 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ITGB4P16144 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC19■□□□□ 0.63
ITGB4P16144 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC19■□□□□ 0.63
ITGB4P16144 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ITGB4P16144 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC19■□□□□ 0.63
ITGB4P16144 AC020658.6-201ENST00000623564 1870 ntBASIC19■□□□□ 0.63
ITGB4P16144 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC19■□□□□ 0.63
ITGB4P16144 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ITGB4P16144 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ITGB4P16144 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ITGB4P16144 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ITGB4P16144 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC19■□□□□ 0.63
ITGB4P16144 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC19■□□□□ 0.63
ITGB4P16144 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
ITGB4P16144 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
ITGB4P16144 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
ITGB4P16144 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ITGB4P16144 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC19■□□□□ 0.63
ITGB4P16144 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC19■□□□□ 0.63
ITGB4P16144 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC19■□□□□ 0.63
ITGB4P16144 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC19■□□□□ 0.63
ITGB4P16144 SIGLEC18P-201ENST00000602271 909 ntBASIC19■□□□□ 0.63
ITGB4P16144 LINC01783-202ENST00000614408 828 ntBASIC19■□□□□ 0.63
ITGB4P16144 BX284668.2-205ENST00000619677 828 ntBASIC19■□□□□ 0.63
ITGB4P16144 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC19■□□□□ 0.63
ITGB4P16144 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC19■□□□□ 0.63
ITGB4P16144 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC19■□□□□ 0.63
ITGB4P16144 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC19■□□□□ 0.63
ITGB4P16144 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.99■□□□□ 0.63
ITGB4P16144 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ITGB4P16144 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ITGB4P16144 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ITGB4P16144 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ITGB4P16144 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC18.99■□□□□ 0.63
ITGB4P16144 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ITGB4P16144 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC18.99■□□□□ 0.63
ITGB4P16144 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ITGB4P16144 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ITGB4P16144 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
ITGB4P16144 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ITGB4P16144 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ITGB4P16144 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ITGB4P16144 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ITGB4P16144 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC18.99■□□□□ 0.63
ITGB4P16144 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC18.99■□□□□ 0.63
ITGB4P16144 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ITGB4P16144 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC18.99■□□□□ 0.63
ITGB4P16144 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC18.99■□□□□ 0.63
ITGB4P16144 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ITGB4P16144 AC018463.1-201ENST00000456674 917 ntBASIC18.99■□□□□ 0.63
ITGB4P16144 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
ITGB4P16144 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC18.99■□□□□ 0.63
ITGB4P16144 IGHVIII-5-2-201ENST00000522505 261 ntBASIC18.99■□□□□ 0.63
ITGB4P16144 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC18.99■□□□□ 0.63
ITGB4P16144 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC18.99■□□□□ 0.63
ITGB4P16144 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ITGB4P16144 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ITGB4P16144 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
ITGB4P16144 AL118508.1-201ENST00000613502 2345 ntBASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms