Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.36□□□□□ -0.27
CCL2P13500 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.36□□□□□ -0.27
CCL2P13500 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.36□□□□□ -0.27
CCL2P13500 AC124283.3-201ENST00000570869 594 ntBASIC13.36□□□□□ -0.27
CCL2P13500 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.36□□□□□ -0.27
CCL2P13500 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CCL2P13500 AL033527.5-201ENST00000641382 801 ntBASIC13.36□□□□□ -0.27
CCL2P13500 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL2P13500 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL2P13500 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCL2P13500 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL2P13500 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL2P13500 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCL2P13500 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCL2P13500 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL2P13500 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCL2P13500 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CCL2P13500 AP000845.1-201ENST00000581677 2131 ntBASIC13.36□□□□□ -0.27
CCL2P13500 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL2P13500 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.36□□□□□ -0.27
CCL2P13500 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL2P13500 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.35□□□□□ -0.27
CCL2P13500 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL2P13500 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL2P13500 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL2P13500 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL2P13500 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.35□□□□□ -0.27
CCL2P13500 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.35□□□□□ -0.27
CCL2P13500 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.35□□□□□ -0.27
CCL2P13500 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CCL2P13500 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL2P13500 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL2P13500 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCL2P13500 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCL2P13500 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL2P13500 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.35□□□□□ -0.27
CCL2P13500 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL2P13500 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL2P13500 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CCL2P13500 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL2P13500 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL2P13500 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL2P13500 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CCL2P13500 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL2P13500 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL2P13500 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL2P13500 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL2P13500 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL2P13500 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL2P13500 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CCL2P13500 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCL2P13500 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL2P13500 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.35□□□□□ -0.27
CCL2P13500 AP006294.1-201ENST00000415407 339 ntBASIC13.35□□□□□ -0.27
CCL2P13500 SOCS2P1-201ENST00000417727 557 ntBASIC13.35□□□□□ -0.27
CCL2P13500 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.35□□□□□ -0.27
CCL2P13500 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.35□□□□□ -0.27
CCL2P13500 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.35□□□□□ -0.27
CCL2P13500 RN7SL752P-201ENST00000463779 287 ntBASIC13.35□□□□□ -0.27
CCL2P13500 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.35□□□□□ -0.27
CCL2P13500 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CCL2P13500 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCL2P13500 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.35□□□□□ -0.27
CCL2P13500 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.35□□□□□ -0.27
CCL2P13500 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CCL2P13500 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.35□□□□□ -0.27
CCL2P13500 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.35□□□□□ -0.27
CCL2P13500 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CCL2P13500 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
CCL2P13500 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CCL2P13500 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.35□□□□□ -0.27
CCL2P13500 CU634019.7-201ENST00000624153 1185 ntBASIC13.35□□□□□ -0.27
CCL2P13500 FP236241.2-201ENST00000624906 1185 ntBASIC13.35□□□□□ -0.27
CCL2P13500 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CCL2P13500 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CCL2P13500 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL2P13500 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.35□□□□□ -0.27
CCL2P13500 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL2P13500 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL2P13500 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCL2P13500 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL2P13500 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.35□□□□□ -0.27
CCL2P13500 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CCL2P13500 REXO1L4P-201ENST00000605109 1937 ntBASIC13.35□□□□□ -0.27
CCL2P13500 REXO1L2P-201ENST00000425429 2069 ntBASIC13.35□□□□□ -0.27
CCL2P13500 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL2P13500 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.35□□□□□ -0.27
CCL2P13500 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL2P13500 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CCL2P13500 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL2P13500 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL2P13500 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.34□□□□□ -0.27
CCL2P13500 AL157414.3-201ENST00000624276 1954 ntBASIC13.34□□□□□ -0.27
CCL2P13500 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.34□□□□□ -0.27
CCL2P13500 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL2P13500 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL2P13500 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL2P13500 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CCL2P13500 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CCL2P13500 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms