Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL4P13236 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.31□□□□□ -0.12
CCL4P13236 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CCL4P13236 AL391005.1-201ENST00000623953 2435 ntBASIC14.31□□□□□ -0.12
CCL4P13236 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CCL4P13236 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCL4P13236 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL4P13236 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL4P13236 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.31□□□□□ -0.12
CCL4P13236 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL4P13236 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.31□□□□□ -0.12
CCL4P13236 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL4P13236 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCL4P13236 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCL4P13236 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCL4P13236 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCL4P13236 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.31□□□□□ -0.12
CCL4P13236 RN7SL720P-201ENST00000488178 304 ntBASIC14.31□□□□□ -0.12
CCL4P13236 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCL4P13236 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.31□□□□□ -0.12
CCL4P13236 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.31□□□□□ -0.12
CCL4P13236 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCL4P13236 MIR4783-201ENST00000580343 82 ntBASIC14.31□□□□□ -0.12
CCL4P13236 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCL4P13236 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.31□□□□□ -0.12
CCL4P13236 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
CCL4P13236 BNIP3P13-201ENST00000599968 566 ntBASIC14.31□□□□□ -0.12
CCL4P13236 AC002472.3-201ENST00000640124 621 ntBASIC14.31□□□□□ -0.12
CCL4P13236 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL4P13236 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL4P13236 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL4P13236 AC020916.1-201ENST00000587762 1774 ntBASIC14.31□□□□□ -0.12
CCL4P13236 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CCL4P13236 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL4P13236 AC020910.5-201ENST00000623668 1865 ntBASIC14.31□□□□□ -0.12
CCL4P13236 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL4P13236 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCL4P13236 AC090616.6-203ENST00000579186 1945 ntBASIC14.31□□□□□ -0.12
CCL4P13236 REXO1L4P-201ENST00000605109 1937 ntBASIC14.31□□□□□ -0.12
CCL4P13236 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.31□□□□□ -0.12
CCL4P13236 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.31□□□□□ -0.12
CCL4P13236 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCL4P13236 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL4P13236 AL513523.2-202ENST00000427283 2040 ntBASIC14.31□□□□□ -0.12
CCL4P13236 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCL4P13236 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL4P13236 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCL4P13236 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCL4P13236 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL4P13236 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCL4P13236 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.3□□□□□ -0.12
CCL4P13236 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCL4P13236 AC004899.1-201ENST00000424687 1714 ntBASIC14.3□□□□□ -0.12
CCL4P13236 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.3□□□□□ -0.12
CCL4P13236 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CCL4P13236 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL4P13236 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL4P13236 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
CCL4P13236 RN7SKP175-201ENST00000408472 289 ntBASIC14.3□□□□□ -0.12
CCL4P13236 GGCT-203ENST00000409144 836 ntTSL 2 BASIC14.3□□□□□ -0.12
CCL4P13236 ACTG1P2-201ENST00000415776 1125 ntBASIC14.3□□□□□ -0.12
CCL4P13236 ACTG1P11-201ENST00000425411 1125 ntBASIC14.3□□□□□ -0.12
CCL4P13236 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.3□□□□□ -0.12
CCL4P13236 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.3□□□□□ -0.12
CCL4P13236 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.3□□□□□ -0.12
CCL4P13236 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCL4P13236 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC14.3□□□□□ -0.12
CCL4P13236 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.3□□□□□ -0.12
CCL4P13236 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CCL4P13236 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCL4P13236 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC14.3□□□□□ -0.12
CCL4P13236 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
CCL4P13236 AL162426.1-201ENST00000624141 743 ntBASIC14.3□□□□□ -0.12
CCL4P13236 AC004923.1-202ENST00000642106 209 ntBASIC14.3□□□□□ -0.12
CCL4P13236 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL4P13236 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CCL4P13236 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
CCL4P13236 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.3□□□□□ -0.12
CCL4P13236 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCL4P13236 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.3□□□□□ -0.12
CCL4P13236 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CCL4P13236 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL4P13236 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL4P13236 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL4P13236 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL4P13236 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.3□□□□□ -0.12
CCL4P13236 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL4P13236 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CCL4P13236 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
CCL4P13236 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCL4P13236 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.3□□□□□ -0.12
CCL4P13236 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL4P13236 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CCL4P13236 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
CCL4P13236 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL4P13236 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL4P13236 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
CCL4P13236 PCDHA1-201ENST00000378133 2726 ntBASIC14.29□□□□□ -0.12
CCL4P13236 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL4P13236 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms