Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBL4AP11441 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.24□□□□□ -0.13
UBL4AP11441 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBL4AP11441 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.24□□□□□ -0.13
UBL4AP11441 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
UBL4AP11441 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UBL4AP11441 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UBL4AP11441 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.24□□□□□ -0.13
UBL4AP11441 MRPS18AP1-201ENST00000414458 589 ntBASIC14.24□□□□□ -0.13
UBL4AP11441 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.24□□□□□ -0.13
UBL4AP11441 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UBL4AP11441 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.24□□□□□ -0.13
UBL4AP11441 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBL4AP11441 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.24□□□□□ -0.13
UBL4AP11441 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.24□□□□□ -0.13
UBL4AP11441 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.24□□□□□ -0.13
UBL4AP11441 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.24□□□□□ -0.13
UBL4AP11441 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.24□□□□□ -0.13
UBL4AP11441 AL158212.4-201ENST00000624062 1286 ntBASIC14.24□□□□□ -0.13
UBL4AP11441 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
UBL4AP11441 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
UBL4AP11441 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBL4AP11441 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBL4AP11441 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBL4AP11441 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.24□□□□□ -0.13
UBL4AP11441 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UBL4AP11441 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UBL4AP11441 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
UBL4AP11441 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBL4AP11441 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
UBL4AP11441 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.24□□□□□ -0.13
UBL4AP11441 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBL4AP11441 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UBL4AP11441 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UBL4AP11441 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBL4AP11441 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UBL4AP11441 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBL4AP11441 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UBL4AP11441 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBL4AP11441 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
UBL4AP11441 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.23□□□□□ -0.13
UBL4AP11441 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBL4AP11441 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBL4AP11441 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.23□□□□□ -0.13
UBL4AP11441 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UBL4AP11441 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBL4AP11441 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBL4AP11441 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UBL4AP11441 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
UBL4AP11441 MIR770-201ENST00000390219 98 ntBASIC14.23□□□□□ -0.13
UBL4AP11441 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.23□□□□□ -0.13
UBL4AP11441 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.23□□□□□ -0.13
UBL4AP11441 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.23□□□□□ -0.13
UBL4AP11441 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.23□□□□□ -0.13
UBL4AP11441 AL589987.1-201ENST00000453380 819 ntBASIC14.23□□□□□ -0.13
UBL4AP11441 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.23□□□□□ -0.13
UBL4AP11441 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UBL4AP11441 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.23□□□□□ -0.13
UBL4AP11441 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.23□□□□□ -0.13
UBL4AP11441 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.23□□□□□ -0.13
UBL4AP11441 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.23□□□□□ -0.13
UBL4AP11441 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.23□□□□□ -0.13
UBL4AP11441 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.23□□□□□ -0.13
UBL4AP11441 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBL4AP11441 AC000095.1-201ENST00000603208 874 ntBASIC14.23□□□□□ -0.13
UBL4AP11441 AC025181.2-201ENST00000606994 802 ntBASIC14.23□□□□□ -0.13
UBL4AP11441 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.23□□□□□ -0.13
UBL4AP11441 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.23□□□□□ -0.13
UBL4AP11441 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.23□□□□□ -0.13
UBL4AP11441 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.23□□□□□ -0.13
UBL4AP11441 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
UBL4AP11441 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBL4AP11441 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
UBL4AP11441 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.23□□□□□ -0.13
UBL4AP11441 COL6A4P2-202ENST00000504443 2753 ntBASIC14.23□□□□□ -0.13
UBL4AP11441 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.23□□□□□ -0.13
UBL4AP11441 CICP23-201ENST00000605013 2741 ntBASIC14.23□□□□□ -0.13
UBL4AP11441 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBL4AP11441 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.23□□□□□ -0.13
UBL4AP11441 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
UBL4AP11441 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBL4AP11441 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.23□□□□□ -0.13
UBL4AP11441 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.23□□□□□ -0.13
UBL4AP11441 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBL4AP11441 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBL4AP11441 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBL4AP11441 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
UBL4AP11441 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UBL4AP11441 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.22□□□□□ -0.13
UBL4AP11441 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
UBL4AP11441 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
UBL4AP11441 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
UBL4AP11441 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
UBL4AP11441 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBL4AP11441 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBL4AP11441 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBL4AP11441 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.22□□□□□ -0.13
UBL4AP11441 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.22□□□□□ -0.13
UBL4AP11441 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBL4AP11441 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms