Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
FREM3P0C091 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
FREM3P0C091 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
FREM3P0C091 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
FREM3P0C091 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
FREM3P0C091 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.88□□□□□ -0.19
FREM3P0C091 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
FREM3P0C091 HLA-V-201ENST00000429037 534 ntBASIC13.88□□□□□ -0.19
FREM3P0C091 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
FREM3P0C091 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
FREM3P0C091 CNN2P10-201ENST00000443067 918 ntBASIC13.88□□□□□ -0.19
FREM3P0C091 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
FREM3P0C091 MIR4538-201ENST00000581377 78 ntBASIC13.88□□□□□ -0.19
FREM3P0C091 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.88□□□□□ -0.19
FREM3P0C091 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
FREM3P0C091 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
FREM3P0C091 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.88□□□□□ -0.19
FREM3P0C091 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
FREM3P0C091 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
FREM3P0C091 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
FREM3P0C091 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
FREM3P0C091 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
FREM3P0C091 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
FREM3P0C091 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
FREM3P0C091 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FREM3P0C091 CICP24-201ENST00000605464 2705 ntBASIC13.87□□□□□ -0.19
FREM3P0C091 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
FREM3P0C091 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.87□□□□□ -0.19
FREM3P0C091 AC148477.4-201ENST00000613430 1793 ntBASIC13.87□□□□□ -0.19
FREM3P0C091 REXO1L2P-201ENST00000425429 2069 ntBASIC13.87□□□□□ -0.19
FREM3P0C091 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FREM3P0C091 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
FREM3P0C091 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.87□□□□□ -0.19
FREM3P0C091 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FREM3P0C091 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FREM3P0C091 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FREM3P0C091 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FREM3P0C091 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FREM3P0C091 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.87□□□□□ -0.19
FREM3P0C091 EIF3FP3-201ENST00000434851 1086 ntBASIC13.87□□□□□ -0.19
FREM3P0C091 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FREM3P0C091 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.87□□□□□ -0.19
FREM3P0C091 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.87□□□□□ -0.19
FREM3P0C091 ENPP7P5-201ENST00000541031 1031 ntBASIC13.87□□□□□ -0.19
FREM3P0C091 KRT90P-201ENST00000549264 1064 ntBASIC13.87□□□□□ -0.19
FREM3P0C091 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.87□□□□□ -0.19
FREM3P0C091 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.87□□□□□ -0.19
FREM3P0C091 AC009542.2-202ENST00000619004 1067 ntBASIC13.87□□□□□ -0.19
FREM3P0C091 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
FREM3P0C091 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.87□□□□□ -0.19
FREM3P0C091 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
FREM3P0C091 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
FREM3P0C091 AC126365.1-201ENST00000578585 1514 ntBASIC13.87□□□□□ -0.19
FREM3P0C091 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
FREM3P0C091 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.87□□□□□ -0.19
FREM3P0C091 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
FREM3P0C091 AC007686.3-201ENST00000619017 3487 ntBASIC13.87□□□□□ -0.19
FREM3P0C091 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FREM3P0C091 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FREM3P0C091 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
FREM3P0C091 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
FREM3P0C091 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FREM3P0C091 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FREM3P0C091 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
FREM3P0C091 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FREM3P0C091 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FREM3P0C091 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
FREM3P0C091 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FREM3P0C091 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
FREM3P0C091 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
FREM3P0C091 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FREM3P0C091 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FREM3P0C091 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FREM3P0C091 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.87□□□□□ -0.19
FREM3P0C091 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.87□□□□□ -0.19
FREM3P0C091 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.87□□□□□ -0.19
FREM3P0C091 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.87□□□□□ -0.19
FREM3P0C091 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
FREM3P0C091 AL590640.2-201ENST00000457038 527 ntBASIC13.87□□□□□ -0.19
FREM3P0C091 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.87□□□□□ -0.19
FREM3P0C091 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FREM3P0C091 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.87□□□□□ -0.19
FREM3P0C091 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.87□□□□□ -0.19
FREM3P0C091 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.87□□□□□ -0.19
FREM3P0C091 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FREM3P0C091 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.87□□□□□ -0.19
FREM3P0C091 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
FREM3P0C091 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.86□□□□□ -0.19
FREM3P0C091 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.86□□□□□ -0.19
FREM3P0C091 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
FREM3P0C091 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.86□□□□□ -0.19
FREM3P0C091 AL157414.3-201ENST00000624276 1954 ntBASIC13.86□□□□□ -0.19
FREM3P0C091 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
FREM3P0C091 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
FREM3P0C091 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
FREM3P0C091 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
FREM3P0C091 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
FREM3P0C091 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
FREM3P0C091 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
FREM3P0C091 AL139094.1-201ENST00000405549 1188 ntBASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms