Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CD48P09326 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD48P09326 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.84■□□□□ 0.13
CD48P09326 BCRP1-201ENST00000444246 691 ntBASIC15.84■□□□□ 0.13
CD48P09326 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.84■□□□□ 0.13
CD48P09326 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.84■□□□□ 0.13
CD48P09326 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CD48P09326 RRP7BP-205ENST00000566851 833 ntBASIC15.84■□□□□ 0.13
CD48P09326 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.84■□□□□ 0.13
CD48P09326 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.84■□□□□ 0.13
CD48P09326 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.84■□□□□ 0.13
CD48P09326 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CD48P09326 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.84■□□□□ 0.13
CD48P09326 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD48P09326 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
CD48P09326 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.84■□□□□ 0.13
CD48P09326 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD48P09326 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.84■□□□□ 0.13
CD48P09326 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.84■□□□□ 0.13
CD48P09326 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CD48P09326 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD48P09326 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CD48P09326 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.84■□□□□ 0.13
CD48P09326 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.84■□□□□ 0.13
CD48P09326 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.84■□□□□ 0.13
CD48P09326 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.84■□□□□ 0.13
CD48P09326 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CD48P09326 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.84■□□□□ 0.13
CD48P09326 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
CD48P09326 AC007541.1-201ENST00000570282 1469 ntBASIC15.84■□□□□ 0.13
CD48P09326 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD48P09326 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
CD48P09326 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD48P09326 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.83■□□□□ 0.13
CD48P09326 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.83■□□□□ 0.13
CD48P09326 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.83■□□□□ 0.13
CD48P09326 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.83■□□□□ 0.13
CD48P09326 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
CD48P09326 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CD48P09326 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CD48P09326 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD48P09326 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD48P09326 AC007292.2-201ENST00000593524 1812 ntBASIC15.83■□□□□ 0.12
CD48P09326 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD48P09326 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD48P09326 AL137783.1-201ENST00000623494 1896 ntBASIC15.83■□□□□ 0.12
CD48P09326 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.83■□□□□ 0.12
CD48P09326 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD48P09326 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD48P09326 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD48P09326 MEP1AP4-201ENST00000423244 1087 ntBASIC15.83■□□□□ 0.12
CD48P09326 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.83■□□□□ 0.12
CD48P09326 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD48P09326 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.83■□□□□ 0.12
CD48P09326 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.83■□□□□ 0.12
CD48P09326 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.83■□□□□ 0.12
CD48P09326 AL132655.2-201ENST00000596276 594 ntBASIC15.83■□□□□ 0.12
CD48P09326 AC099568.2-201ENST00000609194 695 ntBASIC15.83■□□□□ 0.12
CD48P09326 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CD48P09326 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CD48P09326 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
CD48P09326 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
CD48P09326 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD48P09326 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CD48P09326 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD48P09326 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD48P09326 INTS4P2-202ENST00000614726 2019 ntBASIC15.83■□□□□ 0.12
CD48P09326 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.83■□□□□ 0.12
CD48P09326 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD48P09326 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.83■□□□□ 0.12
CD48P09326 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CD48P09326 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CD48P09326 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD48P09326 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD48P09326 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CD48P09326 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD48P09326 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD48P09326 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD48P09326 AC005912.2-201ENST00000619492 2400 ntBASIC15.83■□□□□ 0.12
CD48P09326 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.83■□□□□ 0.12
CD48P09326 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD48P09326 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD48P09326 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD48P09326 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CD48P09326 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD48P09326 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD48P09326 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.82■□□□□ 0.12
CD48P09326 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD48P09326 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CD48P09326 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD48P09326 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD48P09326 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD48P09326 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CD48P09326 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD48P09326 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD48P09326 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.82■□□□□ 0.12
CD48P09326 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CD48P09326 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD48P09326 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD48P09326 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms