Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CHGBP05060 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHGBP05060 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC18.29■□□□□ 0.52
CHGBP05060 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC18.29■□□□□ 0.52
CHGBP05060 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CHGBP05060 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHGBP05060 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHGBP05060 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHGBP05060 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CHGBP05060 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHGBP05060 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC18.29■□□□□ 0.52
CHGBP05060 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHGBP05060 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHGBP05060 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC18.28■□□□□ 0.52
CHGBP05060 LRRC59-203ENST00000576448 1531 ntBASIC18.28■□□□□ 0.52
CHGBP05060 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CHGBP05060 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
CHGBP05060 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHGBP05060 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
CHGBP05060 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHGBP05060 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
CHGBP05060 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHGBP05060 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHGBP05060 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHGBP05060 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHGBP05060 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC18.28■□□□□ 0.52
CHGBP05060 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC18.28■□□□□ 0.52
CHGBP05060 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHGBP05060 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHGBP05060 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC18.28■□□□□ 0.52
CHGBP05060 RPS15-201ENST00000233609 534 ntTSL 2 BASIC18.28■□□□□ 0.52
CHGBP05060 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHGBP05060 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHGBP05060 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHGBP05060 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHGBP05060 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHGBP05060 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
CHGBP05060 POM121L8P-201ENST00000417732 1281 ntBASIC18.28■□□□□ 0.52
CHGBP05060 CNN2P8-201ENST00000421872 913 ntBASIC18.28■□□□□ 0.52
CHGBP05060 AC016694.1-201ENST00000434179 700 ntBASIC18.28■□□□□ 0.52
CHGBP05060 POM121L9P-203ENST00000441984 1285 ntBASIC18.28■□□□□ 0.52
CHGBP05060 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC18.28■□□□□ 0.52
CHGBP05060 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHGBP05060 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CHGBP05060 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHGBP05060 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC18.28■□□□□ 0.52
CHGBP05060 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
CHGBP05060 RPS15-205ENST00000586686 562 ntTSL 5 BASIC18.28■□□□□ 0.52
CHGBP05060 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC18.28■□□□□ 0.52
CHGBP05060 RPS15-208ENST00000591804 711 ntTSL 5 BASIC18.28■□□□□ 0.52
CHGBP05060 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHGBP05060 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CHGBP05060 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CHGBP05060 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHGBP05060 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHGBP05060 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHGBP05060 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHGBP05060 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHGBP05060 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHGBP05060 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC18.28■□□□□ 0.52
CHGBP05060 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHGBP05060 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
CHGBP05060 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC18.28■□□□□ 0.52
CHGBP05060 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHGBP05060 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHGBP05060 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CHGBP05060 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHGBP05060 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CHGBP05060 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHGBP05060 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHGBP05060 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHGBP05060 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHGBP05060 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHGBP05060 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CHGBP05060 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHGBP05060 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHGBP05060 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHGBP05060 SF1-209ENST00000433274 2317 ntTSL 2 BASIC18.27■□□□□ 0.52
CHGBP05060 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHGBP05060 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHGBP05060 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CHGBP05060 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHGBP05060 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHGBP05060 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CHGBP05060 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CHGBP05060 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
CHGBP05060 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHGBP05060 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHGBP05060 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.27■□□□□ 0.52
CHGBP05060 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.27■□□□□ 0.52
CHGBP05060 NUS1P3-201ENST00000423502 862 ntBASIC18.27■□□□□ 0.52
CHGBP05060 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC18.27■□□□□ 0.52
CHGBP05060 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC18.27■□□□□ 0.52
CHGBP05060 RPL7P3-201ENST00000441388 714 ntBASIC18.27■□□□□ 0.52
CHGBP05060 AC234783.1-201ENST00000441761 496 ntBASIC18.27■□□□□ 0.52
CHGBP05060 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC18.27■□□□□ 0.52
CHGBP05060 FO681548.1-201ENST00000455617 1132 ntBASIC18.27■□□□□ 0.52
CHGBP05060 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.27■□□□□ 0.52
CHGBP05060 MFF-223ENST00000524634 647 ntTSL 2 BASIC18.27■□□□□ 0.52
CHGBP05060 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms