Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.62□□□□□ -0.23
APOC1P02654 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOC1P02654 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.62□□□□□ -0.23
APOC1P02654 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOC1P02654 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APOC1P02654 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOC1P02654 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APOC1P02654 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
APOC1P02654 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.62□□□□□ -0.23
APOC1P02654 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APOC1P02654 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOC1P02654 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.62□□□□□ -0.23
APOC1P02654 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APOC1P02654 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOC1P02654 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.62□□□□□ -0.23
APOC1P02654 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
APOC1P02654 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOC1P02654 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APOC1P02654 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
APOC1P02654 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.62□□□□□ -0.23
APOC1P02654 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APOC1P02654 KRT18P13-201ENST00000400056 1290 ntBASIC13.62□□□□□ -0.23
APOC1P02654 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.62□□□□□ -0.23
APOC1P02654 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.62□□□□□ -0.23
APOC1P02654 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOC1P02654 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
APOC1P02654 RN7SL618P-201ENST00000477850 296 ntBASIC13.62□□□□□ -0.23
APOC1P02654 AC067863.1-201ENST00000494933 530 ntBASIC13.62□□□□□ -0.23
APOC1P02654 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APOC1P02654 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.62□□□□□ -0.23
APOC1P02654 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.62□□□□□ -0.23
APOC1P02654 AC015910.1-201ENST00000579400 975 ntBASIC13.62□□□□□ -0.23
APOC1P02654 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.62□□□□□ -0.23
APOC1P02654 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.62□□□□□ -0.23
APOC1P02654 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
APOC1P02654 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.62□□□□□ -0.23
APOC1P02654 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.62□□□□□ -0.23
APOC1P02654 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.62□□□□□ -0.23
APOC1P02654 AL645728.2-202ENST00000641679 227 ntBASIC13.62□□□□□ -0.23
APOC1P02654 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
APOC1P02654 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
APOC1P02654 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.62□□□□□ -0.23
APOC1P02654 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.62□□□□□ -0.23
APOC1P02654 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOC1P02654 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.62□□□□□ -0.23
APOC1P02654 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOC1P02654 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
APOC1P02654 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
APOC1P02654 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
APOC1P02654 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.62□□□□□ -0.23
APOC1P02654 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.62□□□□□ -0.23
APOC1P02654 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APOC1P02654 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
APOC1P02654 AC010327.5-201ENST00000586923 3061 ntBASIC13.62□□□□□ -0.23
APOC1P02654 REXO1L2P-201ENST00000425429 2069 ntBASIC13.62□□□□□ -0.23
APOC1P02654 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.62□□□□□ -0.23
APOC1P02654 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.62□□□□□ -0.23
APOC1P02654 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOC1P02654 AC023024.2-201ENST00000623561 1993 ntBASIC13.62□□□□□ -0.23
APOC1P02654 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOC1P02654 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APOC1P02654 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOC1P02654 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
APOC1P02654 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
APOC1P02654 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
APOC1P02654 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOC1P02654 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOC1P02654 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOC1P02654 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
APOC1P02654 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
APOC1P02654 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.61□□□□□ -0.23
APOC1P02654 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.61□□□□□ -0.23
APOC1P02654 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOC1P02654 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.61□□□□□ -0.23
APOC1P02654 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOC1P02654 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.61□□□□□ -0.23
APOC1P02654 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOC1P02654 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
APOC1P02654 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
APOC1P02654 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
APOC1P02654 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
APOC1P02654 AC015922.1-201ENST00000421102 1152 ntBASIC13.61□□□□□ -0.23
APOC1P02654 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.61□□□□□ -0.23
APOC1P02654 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.61□□□□□ -0.23
APOC1P02654 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.61□□□□□ -0.23
APOC1P02654 SDHAP3-202ENST00000515467 728 ntBASIC13.61□□□□□ -0.23
APOC1P02654 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
APOC1P02654 AC025048.3-201ENST00000590609 569 ntBASIC13.61□□□□□ -0.23
APOC1P02654 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.61□□□□□ -0.23
APOC1P02654 AC074044.1-201ENST00000609673 707 ntBASIC13.61□□□□□ -0.23
APOC1P02654 AC005702.4-201ENST00000618393 416 ntBASIC13.61□□□□□ -0.23
APOC1P02654 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.61□□□□□ -0.23
APOC1P02654 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
APOC1P02654 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
APOC1P02654 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
APOC1P02654 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
APOC1P02654 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOC1P02654 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.61□□□□□ -0.23
APOC1P02654 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOC1P02654 MROH4P-201ENST00000431302 1578 ntBASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms