Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV12-3P01733 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV12-3P01733 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
TRBV12-3P01733 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC11.83□□□□□ -0.52
TRBV12-3P01733 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC11.83□□□□□ -0.52
TRBV12-3P01733 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC11.83□□□□□ -0.52
TRBV12-3P01733 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV12-3P01733 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV12-3P01733 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV12-3P01733 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV12-3P01733 AC104457.1-201ENST00000401024 814 ntBASIC11.83□□□□□ -0.52
TRBV12-3P01733 TMEM14DP-201ENST00000422205 345 ntBASIC11.83□□□□□ -0.52
TRBV12-3P01733 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC11.83□□□□□ -0.52
TRBV12-3P01733 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC11.83□□□□□ -0.52
TRBV12-3P01733 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC11.83□□□□□ -0.52
TRBV12-3P01733 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC11.83□□□□□ -0.52
TRBV12-3P01733 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV12-3P01733 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV12-3P01733 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC11.83□□□□□ -0.52
TRBV12-3P01733 AC005225.4-201ENST00000557330 545 ntBASIC11.83□□□□□ -0.52
TRBV12-3P01733 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV12-3P01733 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC11.83□□□□□ -0.52
TRBV12-3P01733 AC010319.3-201ENST00000597028 470 ntBASIC11.83□□□□□ -0.52
TRBV12-3P01733 METTL26-214ENST00000614890 801 ntTSL 3 BASIC11.83□□□□□ -0.52
TRBV12-3P01733 IGHV3-72-202ENST00000621503 303 ntBASIC11.83□□□□□ -0.52
TRBV12-3P01733 BX539320.1-201ENST00000623759 877 ntBASIC11.83□□□□□ -0.52
TRBV12-3P01733 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC11.83□□□□□ -0.52
TRBV12-3P01733 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
TRBV12-3P01733 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV12-3P01733 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV12-3P01733 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV12-3P01733 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV12-3P01733 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV12-3P01733 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV12-3P01733 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV12-3P01733 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV12-3P01733 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV12-3P01733 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV12-3P01733 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV12-3P01733 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV12-3P01733 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV12-3P01733 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV12-3P01733 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV12-3P01733 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV12-3P01733 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC11.83□□□□□ -0.52
TRBV12-3P01733 PES1-204ENST00000402284 2144 ntTSL 5 BASIC11.83□□□□□ -0.52
TRBV12-3P01733 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC11.83□□□□□ -0.52
TRBV12-3P01733 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC11.83□□□□□ -0.52
TRBV12-3P01733 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV12-3P01733 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC11.83□□□□□ -0.52
TRBV12-3P01733 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC11.83□□□□□ -0.52
TRBV12-3P01733 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC11.83□□□□□ -0.52
TRBV12-3P01733 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV12-3P01733 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TRBV12-3P01733 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRBV12-3P01733 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC11.82□□□□□ -0.52
TRBV12-3P01733 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TRBV12-3P01733 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRBV12-3P01733 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
TRBV12-3P01733 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRBV12-3P01733 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRBV12-3P01733 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRBV12-3P01733 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRBV12-3P01733 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC11.82□□□□□ -0.52
TRBV12-3P01733 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRBV12-3P01733 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TRBV12-3P01733 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRBV12-3P01733 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
TRBV12-3P01733 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
TRBV12-3P01733 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TRBV12-3P01733 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
TRBV12-3P01733 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRBV12-3P01733 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRBV12-3P01733 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TRBV12-3P01733 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
TRBV12-3P01733 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRBV12-3P01733 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC11.82□□□□□ -0.52
TRBV12-3P01733 COPE-202ENST00000349893 948 ntTSL 2 BASIC11.82□□□□□ -0.52
TRBV12-3P01733 RNU1-114P-201ENST00000365297 166 ntBASIC11.82□□□□□ -0.52
TRBV12-3P01733 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRBV12-3P01733 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TRBV12-3P01733 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC11.82□□□□□ -0.52
TRBV12-3P01733 GRAP-202ENST00000395635 834 ntTSL 2 BASIC11.82□□□□□ -0.52
TRBV12-3P01733 AL512384.1-201ENST00000406683 331 ntBASIC11.82□□□□□ -0.52
TRBV12-3P01733 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
TRBV12-3P01733 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC11.82□□□□□ -0.52
TRBV12-3P01733 NME2P1-201ENST00000426182 414 ntBASIC11.82□□□□□ -0.52
TRBV12-3P01733 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TRBV12-3P01733 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC11.82□□□□□ -0.52
TRBV12-3P01733 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TRBV12-3P01733 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC11.82□□□□□ -0.52
TRBV12-3P01733 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
TRBV12-3P01733 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
TRBV12-3P01733 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC11.82□□□□□ -0.52
TRBV12-3P01733 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC11.82□□□□□ -0.52
TRBV12-3P01733 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRBV12-3P01733 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
TRBV12-3P01733 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
TRBV12-3P01733 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TRBV12-3P01733 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms