Protein–RNA interactions for Protein: P00374

DHFR, Dihydrofolate reductase, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP00374 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.34□□□□□ -0.27
DHFRP00374 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.34□□□□□ -0.27
DHFRP00374 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
DHFRP00374 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.34□□□□□ -0.27
DHFRP00374 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.34□□□□□ -0.27
DHFRP00374 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
DHFRP00374 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
DHFRP00374 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
DHFRP00374 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.27
DHFRP00374 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
DHFRP00374 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.33□□□□□ -0.27
DHFRP00374 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
DHFRP00374 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
DHFRP00374 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DHFRP00374 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.33□□□□□ -0.28
DHFRP00374 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
DHFRP00374 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
DHFRP00374 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
DHFRP00374 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
DHFRP00374 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
DHFRP00374 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
DHFRP00374 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DHFRP00374 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
DHFRP00374 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
DHFRP00374 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.33□□□□□ -0.28
DHFRP00374 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
DHFRP00374 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DHFRP00374 AC004870.1-201ENST00000315132 882 ntBASIC13.33□□□□□ -0.28
DHFRP00374 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC13.33□□□□□ -0.28
DHFRP00374 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.33□□□□□ -0.28
DHFRP00374 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.33□□□□□ -0.28
DHFRP00374 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC13.33□□□□□ -0.28
DHFRP00374 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
DHFRP00374 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC13.33□□□□□ -0.28
DHFRP00374 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.33□□□□□ -0.28
DHFRP00374 TOLLIP-AS1-201ENST00000530897 939 ntBASIC13.33□□□□□ -0.28
DHFRP00374 AC021087.4-201ENST00000563761 564 ntBASIC13.33□□□□□ -0.28
DHFRP00374 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
DHFRP00374 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC13.33□□□□□ -0.28
DHFRP00374 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC13.33□□□□□ -0.28
DHFRP00374 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DHFRP00374 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
DHFRP00374 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DHFRP00374 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
DHFRP00374 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
DHFRP00374 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.33□□□□□ -0.28
DHFRP00374 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DHFRP00374 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
DHFRP00374 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.33□□□□□ -0.28
DHFRP00374 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
DHFRP00374 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DHFRP00374 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
DHFRP00374 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC13.33□□□□□ -0.28
DHFRP00374 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
DHFRP00374 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.32□□□□□ -0.28
DHFRP00374 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
DHFRP00374 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DHFRP00374 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
DHFRP00374 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DHFRP00374 AC105206.1-202ENST00000314927 2368 ntBASIC13.32□□□□□ -0.28
DHFRP00374 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
DHFRP00374 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
DHFRP00374 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
DHFRP00374 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DHFRP00374 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.32□□□□□ -0.28
DHFRP00374 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.32□□□□□ -0.28
DHFRP00374 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
DHFRP00374 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DHFRP00374 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.32□□□□□ -0.28
DHFRP00374 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
DHFRP00374 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
DHFRP00374 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
DHFRP00374 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DHFRP00374 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
DHFRP00374 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.32□□□□□ -0.28
DHFRP00374 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
DHFRP00374 FAAHP1-202ENST00000446499 1238 ntBASIC13.32□□□□□ -0.28
DHFRP00374 AC093724.1-201ENST00000448659 1027 ntBASIC13.32□□□□□ -0.28
DHFRP00374 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
DHFRP00374 AC136632.2-201ENST00000512891 861 ntBASIC13.32□□□□□ -0.28
DHFRP00374 AF238378.1-201ENST00000526806 358 ntBASIC13.32□□□□□ -0.28
DHFRP00374 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC13.32□□□□□ -0.28
DHFRP00374 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC13.32□□□□□ -0.28
DHFRP00374 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC13.32□□□□□ -0.28
DHFRP00374 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.32□□□□□ -0.28
DHFRP00374 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.32□□□□□ -0.28
DHFRP00374 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
DHFRP00374 MIR4321-201ENST00000592276 80 ntBASIC13.32□□□□□ -0.28
DHFRP00374 AC021097.1-201ENST00000607902 574 ntBASIC13.32□□□□□ -0.28
DHFRP00374 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC13.32□□□□□ -0.28
DHFRP00374 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
DHFRP00374 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
DHFRP00374 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.32□□□□□ -0.28
DHFRP00374 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
DHFRP00374 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
DHFRP00374 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
DHFRP00374 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.32□□□□□ -0.28
DHFRP00374 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
DHFRP00374 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DHFRP00374 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms