Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF40O75150 AC010336.2-201ENST00000564226 506 ntBASIC16.63■□□□□ 0.25
RNF40O75150 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF40O75150 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF40O75150 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF40O75150 C8orf49-201ENST00000525043 1968 ntBASIC16.63■□□□□ 0.25
RNF40O75150 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
RNF40O75150 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF40O75150 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF40O75150 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF40O75150 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF40O75150 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF40O75150 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF40O75150 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF40O75150 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.63■□□□□ 0.25
RNF40O75150 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF40O75150 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.63■□□□□ 0.25
RNF40O75150 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF40O75150 AC006504.5-208ENST00000588784 2401 ntBASIC16.62■□□□□ 0.25
RNF40O75150 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF40O75150 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF40O75150 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF40O75150 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
RNF40O75150 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF40O75150 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF40O75150 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF40O75150 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF40O75150 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RNF40O75150 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF40O75150 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF40O75150 AC010327.5-201ENST00000586923 3061 ntBASIC16.62■□□□□ 0.25
RNF40O75150 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RNF40O75150 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF40O75150 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF40O75150 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RNF40O75150 OS9-204ENST00000389146 2091 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF40O75150 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF40O75150 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF40O75150 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF40O75150 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF40O75150 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF40O75150 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF40O75150 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF40O75150 SPDYE19P-201ENST00000338590 713 ntBASIC16.62■□□□□ 0.25
RNF40O75150 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
RNF40O75150 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF40O75150 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.62■□□□□ 0.25
RNF40O75150 INE1-201ENST00000456273 945 ntBASIC16.62■□□□□ 0.25
RNF40O75150 GIMAP3P-201ENST00000495150 836 ntBASIC16.62■□□□□ 0.25
RNF40O75150 DOC2GP-202ENST00000514950 1163 ntBASIC16.62■□□□□ 0.25
RNF40O75150 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
RNF40O75150 IGHV3-71-201ENST00000523324 359 ntBASIC16.62■□□□□ 0.25
RNF40O75150 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF40O75150 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.62■□□□□ 0.25
RNF40O75150 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF40O75150 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
RNF40O75150 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF40O75150 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF40O75150 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF40O75150 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF40O75150 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC16.62■□□□□ 0.25
RNF40O75150 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF40O75150 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF40O75150 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF40O75150 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF40O75150 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF40O75150 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF40O75150 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF40O75150 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF40O75150 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF40O75150 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RNF40O75150 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF40O75150 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF40O75150 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF40O75150 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
RNF40O75150 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
RNF40O75150 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF40O75150 C1R-201ENST00000535233 2211 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF40O75150 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF40O75150 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF40O75150 OS9-207ENST00000439210 1946 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF40O75150 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.61■□□□□ 0.25
RNF40O75150 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF40O75150 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RNF40O75150 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.61■□□□□ 0.25
RNF40O75150 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF40O75150 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF40O75150 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RNF40O75150 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
RNF40O75150 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.61■□□□□ 0.25
RNF40O75150 AC087499.6-201ENST00000411576 835 ntBASIC16.61■□□□□ 0.25
RNF40O75150 AP006294.1-201ENST00000415407 339 ntBASIC16.61■□□□□ 0.25
RNF40O75150 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RNF40O75150 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF40O75150 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.61■□□□□ 0.25
RNF40O75150 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.61■□□□□ 0.25
RNF40O75150 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RNF40O75150 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.61■□□□□ 0.25
RNF40O75150 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF40O75150 HILS1-202ENST00000545329 423 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms