Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CTNND1O60716 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTNND1O60716 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CTNND1O60716 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTNND1O60716 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC17.75■□□□□ 0.43
CTNND1O60716 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC17.75■□□□□ 0.43
CTNND1O60716 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTNND1O60716 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.75■□□□□ 0.43
CTNND1O60716 AC022217.1-201ENST00000521069 738 ntBASIC17.75■□□□□ 0.43
CTNND1O60716 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.75■□□□□ 0.43
CTNND1O60716 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTNND1O60716 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CTNND1O60716 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.75■□□□□ 0.43
CTNND1O60716 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CTNND1O60716 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC17.75■□□□□ 0.43
CTNND1O60716 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.75■□□□□ 0.43
CTNND1O60716 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.75■□□□□ 0.43
CTNND1O60716 RN7SL774P-201ENST00000577467 290 ntBASIC17.75■□□□□ 0.43
CTNND1O60716 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC17.75■□□□□ 0.43
CTNND1O60716 BNIP3P13-201ENST00000599968 566 ntBASIC17.75■□□□□ 0.43
CTNND1O60716 AC097724.1-201ENST00000609581 426 ntBASIC17.75■□□□□ 0.43
CTNND1O60716 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTNND1O60716 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTNND1O60716 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTNND1O60716 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTNND1O60716 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
CTNND1O60716 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.75■□□□□ 0.43
CTNND1O60716 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTNND1O60716 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CTNND1O60716 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CTNND1O60716 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CTNND1O60716 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CTNND1O60716 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CTNND1O60716 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTNND1O60716 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.75■□□□□ 0.43
CTNND1O60716 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTNND1O60716 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTNND1O60716 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTNND1O60716 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CTNND1O60716 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CTNND1O60716 AC009090.5-201ENST00000624886 2285 ntBASIC17.74■□□□□ 0.43
CTNND1O60716 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CTNND1O60716 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.74■□□□□ 0.43
CTNND1O60716 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTNND1O60716 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTNND1O60716 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTNND1O60716 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTNND1O60716 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTNND1O60716 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTNND1O60716 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.74■□□□□ 0.43
CTNND1O60716 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTNND1O60716 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTNND1O60716 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.74■□□□□ 0.43
CTNND1O60716 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTNND1O60716 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
CTNND1O60716 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.74■□□□□ 0.43
CTNND1O60716 AL133466.1-201ENST00000447582 150 ntBASIC17.74■□□□□ 0.43
CTNND1O60716 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC17.74■□□□□ 0.43
CTNND1O60716 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CTNND1O60716 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC17.74■□□□□ 0.43
CTNND1O60716 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC17.74■□□□□ 0.43
CTNND1O60716 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC17.74■□□□□ 0.43
CTNND1O60716 AL645939.5-201ENST00000606834 243 ntBASIC17.74■□□□□ 0.43
CTNND1O60716 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC17.74■□□□□ 0.43
CTNND1O60716 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTNND1O60716 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTNND1O60716 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTNND1O60716 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTNND1O60716 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTNND1O60716 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.74■□□□□ 0.43
CTNND1O60716 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.74■□□□□ 0.43
CTNND1O60716 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.74■□□□□ 0.43
CTNND1O60716 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CTNND1O60716 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTNND1O60716 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.74■□□□□ 0.43
CTNND1O60716 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CTNND1O60716 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTNND1O60716 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CTNND1O60716 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CTNND1O60716 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTNND1O60716 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CTNND1O60716 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTNND1O60716 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTNND1O60716 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CTNND1O60716 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CTNND1O60716 CICP13-201ENST00000422015 2789 ntBASIC17.73■□□□□ 0.43
CTNND1O60716 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTNND1O60716 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CTNND1O60716 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.73■□□□□ 0.43
CTNND1O60716 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTNND1O60716 TUBB8P8-201ENST00000458717 1058 ntBASIC17.73■□□□□ 0.43
CTNND1O60716 IMP3P2-201ENST00000489760 475 ntBASIC17.73■□□□□ 0.43
CTNND1O60716 AC245884.6-201ENST00000515672 1067 ntBASIC17.73■□□□□ 0.43
CTNND1O60716 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.73■□□□□ 0.43
CTNND1O60716 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC17.73■□□□□ 0.43
CTNND1O60716 MIR4683-201ENST00000579659 81 ntBASIC17.73■□□□□ 0.43
CTNND1O60716 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC17.73■□□□□ 0.43
CTNND1O60716 AC100757.4-201ENST00000626934 759 ntBASIC17.73■□□□□ 0.43
CTNND1O60716 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTNND1O60716 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms